Protein

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Genbank accession
UYD60200.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSKQSIIIGNAVDDGTGDYMRRGGQKINDNFTELYSELGDGSVPHAAGAWKRYSTVGTPLNVVFGKAYTIDTTGGQITVNLPAGKPSDYGKVIRLRDVNGSWATNPVNLVPGGTDTVKGTTKKHKLWKNYLDAELVYCSPGKWEYADNKRVNGISTANGATVARKEFIAVEGQTDFINIFESSYNPAAVEVYRRGNLLYYGDRISENTDYGSMTAKTPVVSDVTITGGKKNDIVGYSQGVVGTINATKNKVEGLVIVDFRGEVSTNTVIMQFANGAKPMDANVIYVQNGTTGPWFLQYDSSRTAYIGVYPDLITKLTSTASQTYKVSVYKLNTLDGFSIRLAEPCFAGDVVTVVTYLDGIASYRSSYQRYTLRVYDEKLTTSDIKTVPGQRWVGDLSKKARFSLNDFDLLENETYNPFSMEILVNGRTLTRAGEGDLPAFICEGANANDETSCIALGGAWVPSGGDFSTVTDLNDRYREFVINQPLNHKDIITIRWYNNDIGTTLDWEGDGGIKELADARFLVSDRTFNRNSKIMYTDTNNPNASTAVADPETEDAIRFTSVDSLLESVYPVGSIYINAHNPNNPKSYMGFGEWRRFGQGRVPVSWNEDNPNDPNFGLNTNDKDVNGNPRHSAGNTGGAVTNTLGITNIPPVTSSEKALIVDPAGDVLVGGCQFDPDDQGPGFKRYREDLVKARPSEIALPVNNLQPFITVHMWLRVL
Physico‐chemical
properties
protein length:718 AA
molecular weight: 78713,84480 Da
isoelectric point:5,21017
aromaticity:0,09749
hydropathy:-0,39401

Domains

Domains [InterPro]
IPR036240
STR
1–220
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–695
DC_2238
IPR008987
ATT
3–146
IPR008987
G3DSA:1.20.5.960
Unmapped
13–42
G3DSA:1.20.5.960 IPR027411
UYD60200.1
1 718
Architecture
ATT
STR
ATT
ATT 1-146 | STR 147-564 | ATT 565-717 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD60200.1
1 718
Domain Start End Length (AA) Confidence
N-terminal 1 427 427 0,7364
Central domain 428 626 200 0,4681
C-terminal 627 718 91 0,9771
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-427
Central
428-626
C-terminal
627-718

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM12-TAAL
[NCBI] 		3101605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60200.1 [NCBI]
Genbank nucleotide accession
OP380604 [NCBI]
CDS location
range 139874 -> 142030
strand -
CDS
ATGAGTAAACAATCTATTATCATCGGTAACGCAGTTGATGACGGCACCGGTGATTACATGCGTCGTGGTGGACAGAAGATTAACGACAACTTCACTGAACTATATAGTGAATTGGGCGACGGTTCTGTTCCTCACGCTGCTGGCGCGTGGAAGCGTTATTCTACAGTCGGCACACCGCTTAATGTTGTGTTCGGTAAAGCATACACAATCGACACAACCGGTGGACAAATCACAGTTAACTTGCCTGCTGGTAAGCCATCCGATTACGGTAAAGTAATTCGTCTTCGCGATGTTAACGGCTCTTGGGCAACTAACCCAGTTAACTTAGTTCCTGGCGGCACAGATACCGTTAAAGGAACAACCAAAAAGCACAAGCTTTGGAAGAACTATCTCGATGCCGAACTTGTATATTGCAGTCCTGGTAAATGGGAATATGCAGATAACAAGCGAGTGAACGGAATTAGTACCGCAAACGGTGCTACTGTTGCAAGAAAGGAATTCATTGCAGTTGAAGGCCAAACTGATTTCATTAATATTTTCGAATCCAGTTATAACCCAGCTGCGGTAGAGGTTTATCGTCGCGGTAACTTGCTATATTACGGGGATCGCATTTCCGAGAATACTGACTACGGATCAATGACAGCAAAAACTCCTGTTGTTAGTGATGTGACTATTACAGGTGGCAAGAAAAATGATATCGTTGGCTATTCTCAGGGTGTAGTTGGAACAATCAACGCAACAAAAAATAAAGTTGAAGGACTTGTTATTGTTGATTTTCGTGGAGAAGTGTCTACAAATACCGTTATCATGCAATTTGCAAACGGCGCTAAGCCGATGGACGCAAACGTAATTTACGTTCAAAACGGAACGACTGGACCGTGGTTCTTACAATATGATTCAAGTCGTACCGCATATATTGGTGTTTATCCAGATCTGATTACAAAGCTAACATCTACCGCGAGTCAGACATATAAGGTATCGGTATATAAACTGAATACACTTGACGGATTTTCTATTCGTTTGGCAGAGCCATGTTTTGCGGGTGACGTTGTTACCGTTGTGACTTATCTTGACGGAATCGCGTCATATCGTAGCTCATATCAGCGTTATACTCTTAGAGTGTATGACGAAAAACTTACAACTTCTGACATTAAGACTGTTCCAGGACAACGTTGGGTAGGGGATCTCAGTAAGAAAGCTAGATTCAGCTTAAACGACTTTGACCTGCTGGAGAACGAGACTTATAACCCGTTTAGTATGGAGATACTCGTAAACGGTAGAACTCTTACCAGAGCAGGCGAGGGCGATTTGCCAGCGTTTATTTGTGAAGGCGCAAATGCGAATGACGAAACATCTTGTATCGCACTTGGTGGTGCATGGGTACCGTCCGGCGGTGATTTCTCTACAGTAACAGATTTGAATGATCGCTATCGTGAGTTTGTTATCAACCAACCACTAAATCACAAAGATATCATTACTATTCGCTGGTATAATAACGATATCGGGACAACACTTGATTGGGAAGGCGACGGTGGAATCAAAGAGTTGGCAGATGCTCGATTCCTAGTTTCCGATAGAACGTTCAATCGAAATAGCAAAATTATGTACACCGATACAAATAATCCCAATGCATCAACTGCTGTAGCAGATCCAGAAACGGAAGATGCAATCCGATTTACAAGTGTAGATAGTTTACTTGAGTCGGTTTATCCTGTTGGGTCAATTTATATCAACGCACACAACCCAAATAATCCAAAGTCATATATGGGATTTGGAGAATGGCGTAGATTTGGACAAGGTAGAGTTCCAGTTTCGTGGAACGAAGATAATCCGAATGACCCGAATTTTGGATTGAATACCAATGATAAAGACGTCAACGGAAACCCAAGACATTCTGCTGGTAATACTGGAGGTGCTGTAACAAACACACTTGGTATCACCAATATTCCTCCTGTAACATCAAGCGAGAAAGCTTTGATTGTTGATCCTGCTGGTGATGTTCTTGTTGGCGGTTGTCAATTTGACCCAGACGATCAGGGTCCCGGGTTTAAGAGATATCGAGAAGACTTGGTGAAAGCGCGTCCGAGTGAGATTGCGTTGCCAGTTAATAATCTGCAACCGTTTATTACGGTTCATATGTGGCTAAGGGTTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e1be36c40bf68c10d48ab396356476da981250f3c12ed7bb0838e8c7a43e518
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank