Protein

View in Explore
Genbank accession
CAJ28469.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALIFQPNTLRGLFGSRYSQIQTLNIDISVTENLSLRQNVTDKPVQDGARISDNIILLPDQVSIEGLFIDDAYAAASELLGGAQVIGTTWEEKLFMLQTIRKAREPFTIVTSFGAFNNMYFDGDIVAMKHANNANALHFTASLTGIGIIKSRTTAVPANDTKNPKKHAPASDKGKIQKSEKANINSKTTAATVTQEKSKSMLYHGMEWINKRWGN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23674,68380 Da
isoelectric point:9,24562
aromaticity:0,07442
hydropathy:-0,29302

Domains

Domains [InterPro]
IPR048494
ATT
27–157
IPR048494
IPR048494
ATT
27–150
IPR048494 DC_1991
CAJ28469.1
1 215
Architecture
ATT
RBD
ATT 27-157 | RBD 158-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PY100
[NCBI] 		342373 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAJ28469.1 [NCBI]
Genbank nucleotide accession
AM076770.1 [NCBI]
CDS location
range 32271 -> 32918
strand +
CDS
ATGGCGCTTATATTTCAACCTAACACACTAAGGGGGCTTTTCGGCTCCCGATACTCACAGATTCAAACCTTGAACATCGACATTTCAGTAACGGAGAATTTAAGCCTACGTCAGAACGTTACTGATAAGCCTGTTCAGGATGGGGCGCGAATCAGTGATAACATAATCCTACTTCCGGATCAGGTGAGCATTGAGGGTCTGTTTATCGATGATGCTTACGCGGCTGCTTCCGAGTTGCTAGGCGGTGCTCAGGTTATCGGTACAACATGGGAAGAAAAGCTGTTCATGTTGCAGACAATCCGAAAGGCTCGCGAGCCGTTTACAATCGTGACCTCATTCGGTGCGTTTAACAACATGTACTTTGATGGTGACATTGTAGCGATGAAGCACGCAAACAACGCAAACGCGCTACACTTCACAGCCAGCTTAACCGGTATCGGGATCATCAAGAGCCGCACCACGGCGGTTCCTGCTAACGATACAAAGAATCCCAAAAAGCACGCTCCAGCATCCGATAAGGGCAAGATCCAGAAGTCGGAAAAGGCCAACATAAACAGCAAGACAACGGCGGCAACCGTTACGCAAGAGAAATCAAAATCTATGCTATATCATGGCATGGAGTGGATTAACAAAAGATGGGGGAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
66d17a2905d91c845ea3d4e1249ee858070578051126e177754d2ee8c8ea9d60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Broad-host-range Yersinia phage PY100: genome sequence, proteome analysis of virions, and DNA packaging strategy Schwudke,D., Ergin,A., Michael,K., Volkmar,S., Appel,B., Knabner,D., Konietzny,A. and Strauch,E. 2008 17965162 GenBank