Protein

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Genbank accession
UNY40180.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,79
Protein sequence
MPVTLGVTRQYEFTGNDLNNRGCLFPRDTRNSVFVQFAGVNTKQIASDPAKYLAFPFMLKLGSSIVVLYSDGDAHASSDRQIMTRSDDNGASWSSVVFFENTAPGVYNTSLLTGLLAVNEYAVFKVWAVKNVAGALTVAQVPTVVDSGVTYALWSAVINSATTGTIYRTGYGSNGTNTQCGLLQSTDGGFTWTFKSLIFSGAGLNFSEAAIIRTTGNNLVAVCREDTGASNPLYYATSADDGATWSSATLIPTTTINGRQPNLIKTTNGRYILCTGDRAGTSGIGGGGEDIFGTDETGIAMTTSADCQAWGFRTMLAGTYSSDGGQPFAVETTANRVCVVFYHRRGLNKQPVIASTTLDTGEL
Physico‐chemical
properties
protein length:363 AA
molecular weight: 38470,48370 Da
isoelectric point:5,25820
aromaticity:0,09917
hydropathy:-0,03306

Domains

Domains [InterPro]
G3DSA:2.120.10.10
STR
37–360
G3DSA:2.120.10.10
G3DSA:2.120.10.10
STR
40–360
G3DSA:2.120.10.10
IPR036278
STR
47–347
IPR036278
cd15482
ENZ
56–273
cd15482
UNY40180.1
1 363
Architecture
STR
STR 37-360 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UNY40180.1
1 363
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,0768
Central domain 81 279 200 0,1325
C-terminal 280 363 83 0,7808
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-279
C-terminal
280-363

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PcuM_ KLEP17-4
[NCBI] 		2928860 No lineage information
Host Pseudomonas cuatrocienegasensis
[NCBI] 		543360 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UNY40180.1 [NCBI]
Genbank nucleotide accession
OM654375 [NCBI]
CDS location
range 15875 -> 16966
strand +
CDS
ATGCCAGTTACCCTCGGCGTAACGCGCCAGTACGAATTCACCGGAAACGACCTAAACAACCGGGGCTGCCTGTTTCCGCGTGATACCAGAAATTCGGTATTCGTCCAGTTTGCCGGCGTCAATACAAAGCAGATTGCGTCTGACCCGGCAAAGTATCTTGCGTTCCCATTCATGCTAAAGCTCGGCTCGTCTATCGTCGTGCTTTACTCTGATGGTGATGCGCACGCGTCTTCCGACCGGCAGATCATGACCCGTTCCGACGATAACGGTGCGAGCTGGTCTAGCGTCGTATTCTTCGAGAACACTGCGCCGGGGGTTTACAACACTTCCCTGCTGACCGGTTTGCTGGCGGTCAATGAGTACGCTGTGTTCAAGGTTTGGGCAGTTAAGAACGTCGCCGGGGCGCTGACTGTTGCGCAGGTTCCGACTGTTGTTGACTCAGGCGTCACCTACGCGCTCTGGTCGGCTGTGATCAACTCGGCAACCACGGGGACGATCTACCGCACAGGTTACGGCTCAAATGGCACGAACACTCAATGCGGGCTGCTCCAGTCCACTGATGGCGGTTTTACCTGGACGTTCAAAAGCCTGATCTTTTCAGGGGCAGGCCTGAACTTTAGCGAAGCCGCAATCATCCGAACTACAGGTAACAACCTAGTGGCGGTGTGTCGTGAAGATACAGGCGCAAGCAACCCCCTGTACTACGCTACAAGCGCAGATGACGGTGCAACTTGGTCGTCCGCAACGCTGATCCCGACAACCACCATCAATGGTCGCCAACCAAACCTGATCAAAACCACCAACGGCAGATACATCCTCTGCACGGGTGATCGAGCTGGCACCAGCGGTATCGGCGGGGGTGGCGAGGATATATTCGGTACTGACGAAACCGGAATCGCTATGACCACTAGTGCGGATTGCCAAGCCTGGGGATTCCGCACGATGCTCGCGGGCACATACTCTAGCGACGGCGGGCAACCCTTCGCGGTAGAGACCACCGCCAACCGGGTGTGTGTCGTTTTCTACCATCGGCGCGGCCTGAATAAACAACCCGTGATCGCATCGACCACCCTGGACACTGGCGAGTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
968a76d412c0c9e5c540a16d168d9b51e36640423cff57c17c9c1c67449a370c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudomonas bacteriophage vB_PcuM_ KLEP17-4 Simoliunas,E., Simoliuniene,M., Kvederaviciute,K. and Sulcius,S. — — GenBank