Protein

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UniProt accession
R9S734 [UniProt]
Protein name
Virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTIRVNRLIGNSDHNFEIQMPSTANLLVSGSYTADIDSGLVLPVGTTAQRPAIPEAGMIRYNSTLETVEGYNGTDWINLMASVSGASSTSSADIIRKNLVIWLDANNPRSLMPLASDQDANYWYDISGNNFHCAIPTDRYAQESINGQIVKYMDFSVNGSGCAKLVSQGNYTDTPYYPHLTVIFFLKWRTDNSQWRTPLRSRASDHQIIVQSGTRNLGMYDNDATGFNDTGYDIDQFNNWDTKFNMYTWRLSSYESGQYSPNYQCYFNNETTPRATINSSNSRFNRGFHHIGAWGDSSRNPHSSSQNCGSFPVFMVYGRHITTAEQITIYDYYKDTFAI
Physico‐chemical
properties
protein length:340 AA
molecular weight: 38348,81460 Da
isoelectric point:5,56524
aromaticity:0,12647
hydropathy:-0,52029

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
R9S734
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,1318
Central domain 180 329 151 0,0516
C-terminal 330 340 10 0,9962
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-329
C-terminal
330-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM3
[NCBI] 		536453 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus pssm3
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
98307b5960c9d87b85494c508d66b23fbc3e22d32f060e7c32f66fa97d37160d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50