Protein

View in Explore
UniProt accession
A4JX12 [UniProt]
Protein name
Gp17
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSVLQKIVLGEPPSGSGGDNNRVAHIKTNENFGVVERSTPLDLRYLNDSTNLTPDDIGKRFGIWMAEPGKEVGLPPASSVRPNSCIHLFNVQEKVSIKLQAGDLSQLTVLNTGDWAKYVSDGVKIWHVAERGRMMWDEVVGGKLTVGGDLSAAVQSDEGHLVLGKMPGYFYGNSGSVGWWSLDAGGSYQYLLSDHTFRVNDEVVAVCDKGNALRFDWGKKTAGQLGATVDGKYLGYLWHSGNLAQPMTLDTPQYVGTKKTFTQAQEIATTPTGLHTQANLHLNGLGGLSCLGFSGQNNTVGVQLRVSNNTAVAELQCINYNATSFGVLSASNFNQASDRAFKSDIRTLEKVMARLRGKRGVTYLQKNNPEAGRQAGVIANEWWDFPELLGEGPEIDEDGDFIVRQYDESGKEIFGESGPPKGRPSLTFRYTNAVGVLLAGLLETDAALQDALARIAKLEATK
Physico‐chemical
properties
protein length:462 AA
molecular weight: 50030,61580 Da
isoelectric point:5,70848
aromaticity:0,08225
hydropathy:-0,31710

Domains

Domains [InterPro]
DC_0954
ATT
3–150
DC_0954 DC_0745 Coil
IPR030392
CHP
337–462
IPR030392
IPR030392
CHP
337–384
IPR030392 DC_0869
A4JX12
1 462
Architecture
ATT
STR
RBD
ATT 3-150 | STR 151-387 | RBD 388-462
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A4JX12
1 462
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,8152
Central domain 139 337 200 0,1710
C-terminal 338 462 124 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-462

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage phi644-2
[NCBI] 		2881400 Uroviricota > Caudoviricetes > Stanholtvirus >
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABO60848.1 [NCBI]
Genbank nucleotide accession
CP000625 [NCBI]
CDS location
range 13682 -> 15070
strand +
CDS
ATGTCGGTACTTCAAAAAATCGTCCTGGGCGAGCCACCCAGCGGAAGTGGCGGCGACAACAACCGCGTCGCGCACATCAAGACGAACGAGAATTTCGGTGTAGTTGAACGTTCGACTCCGCTCGATCTCAGGTATCTCAACGATAGTACGAACCTGACGCCGGACGATATCGGAAAGCGGTTCGGGATTTGGATGGCCGAGCCGGGAAAGGAAGTCGGGCTCCCGCCCGCGTCGTCGGTGCGGCCGAATTCCTGCATTCACCTGTTCAACGTACAGGAGAAGGTATCGATCAAGTTGCAGGCGGGTGATCTGTCTCAGTTGACCGTGCTGAATACCGGCGACTGGGCGAAGTACGTGTCTGACGGTGTGAAGATCTGGCACGTCGCCGAGCGCGGTCGAATGATGTGGGACGAGGTTGTCGGCGGCAAGCTGACGGTGGGCGGCGATCTGTCTGCGGCGGTTCAAAGCGACGAAGGCCACCTTGTGCTTGGCAAGATGCCCGGCTATTTCTACGGAAATAGCGGGTCGGTGGGGTGGTGGTCTTTAGACGCCGGAGGATCGTACCAATACCTACTCAGCGACCATACGTTTCGTGTCAACGACGAGGTAGTCGCAGTGTGCGACAAGGGGAACGCTCTTCGATTCGACTGGGGGAAGAAGACGGCTGGCCAGCTCGGGGCGACGGTCGACGGCAAATACCTCGGCTATCTCTGGCACAGCGGCAACCTTGCACAACCGATGACGCTTGACACACCGCAGTACGTCGGGACGAAGAAGACGTTTACGCAGGCGCAGGAAATCGCAACGACCCCTACGGGGCTACACACCCAAGCGAACTTGCATCTGAATGGGTTGGGCGGCTTGAGCTGCCTCGGGTTCTCGGGGCAGAACAATACCGTCGGCGTGCAACTCAGGGTTTCGAATAATACGGCGGTTGCCGAATTGCAGTGCATCAACTACAACGCGACCTCGTTCGGCGTGTTGTCTGCGTCGAATTTTAACCAGGCGTCGGATCGCGCTTTCAAGTCCGACATCAGGACGCTCGAAAAAGTGATGGCGCGGCTGCGCGGTAAGCGGGGCGTGACGTATCTGCAAAAGAACAATCCGGAAGCGGGGCGGCAGGCTGGCGTCATCGCGAACGAGTGGTGGGATTTCCCGGAACTGCTCGGCGAGGGGCCGGAGATCGATGAGGACGGCGATTTCATCGTGCGTCAGTACGACGAGAGCGGCAAGGAGATTTTCGGCGAGAGCGGGCCACCGAAGGGGCGGCCGTCGCTGACCTTCCGGTATACGAATGCCGTCGGCGTGCTGTTGGCCGGATTGCTTGAGACGGATGCGGCGTTACAGGATGCGCTCGCGCGAATTGCGAAACTGGAGGCGACGAAGTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
863280f8bb27fa10de700dcd997360b35dcfb405f84415560e586a9bdaacdf84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7373
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50