Protein

View in Explore
Genbank accession
QAY01016.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAEFKLSELNSISEIRSDDLLHVRVKKRTEMLGDEDRRMTYADFLASFRLERFLQLVGGTMTGNLGIVKLTYGGKDLLDPTGNSEIVFGDTAKTFKLNANGLKLTIADASRSATVYHTLNKPSPNELGMRTNDENDARFAIKGTQNTFTASQIFQTNNAGLTLKNTTESALYYEGRDVANNVRFTLGNLGAGTDVTLANTRQNTNIVLGAGAVGINKSLQVTGQVVPSDFGNFDARFYTRDAADQRFVQLAAANTITGNNTFRGTTTLLGDGARLTLKNLTSGKALYIEGQNTDASMKWAVGNYADGSSSVVLTNISNDTYVLLDNMVRVNKSLAITGQVQPTDWTNIDSRYVLIGTYANLAKKNEANTFTLQQNIQSDGEALRIYSKVQNNASYIVGKNTDNSNKWYIGCGTNGSGVASFHNYLTGARIDLSDEVLLSKSLQITGQVKPSDWGNLDARFLKVSGSTATDLVISSTGHGATVGRIISIATRADWNKPQGYSAMLQTPAASVIPSYPADSAAYLHVFAKRDTGVGQLAFLANYSAKGIWLARNLTETDTVTFEKIYTDGTKPTPSELGAYTKAEVDQKIASAVTDSTDLKKVYPVGIVTWFATNQNPNTTLAGMTWTYLNEGVGRTVRIGAANGSDVKSVGGADTVTLSVGHIPSHTHSFSATTSSFDYGTKTSNTTGAHTHSVSGSAASAGSHNHAISWIGQNSTHYSGGGGGKIGTGPGYTDAGGAHTHTISGTAASAGNHAHTVGIGAHTHTVSGNTGGTGSGSAFSVVNLFIRLMAWVRTA
Physico‐chemical
properties
protein length:794 AA
molecular weight: 84247,57760 Da
isoelectric point:8,66379
aromaticity:0,07809
hydropathy:-0,26348

Domains

Domains [InterPro]
DC_0026
STR
1–65
DC_0026 DC_1566
G3DSA:6.20.80.10
STR
159–217
G3DSA:6.20.80.10 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR051934
IPR048388
ATT
160–242
IPR048388 IPR048388 IPR048388
QAY01016.1
1 794
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-159 | ATT 160-242 | STR 243-273 | ATT 274-362 | STR 363-379 | ATT 380-462 | STR 463-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY01016.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 87 87 0,7240
Central domain 88 286 200 0,1929
C-terminal 287 794 507 0,8778
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-87
Central
88-286
C-terminal
287-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcSzw_1
[NCBI] 		2419742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY01016.1 [NCBI]
Genbank nucleotide accession
MH791413.1 [NCBI]
CDS location
range 46797 -> 49181
strand -
CDS
ATGGCAGAATTTAAATTGAGTGAATTAAACTCGATTAGTGAGATTCGTTCTGATGACCTATTGCATGTCAGAGTAAAGAAAAGAACTGAGATGCTAGGTGATGAAGACCGTAGAATGACTTATGCAGATTTCCTTGCATCATTTAGATTGGAAAGATTTCTGCAATTAGTTGGTGGAACCATGACAGGTAATTTAGGAATTGTTAAACTTACCTATGGAGGAAAAGACTTACTTGACCCAACAGGTAATTCTGAAATTGTCTTTGGCGACACTGCAAAAACTTTCAAACTTAATGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCGAGAAGTGCAACAGTTTATCACACTCTGAATAAGCCATCTCCTAACGAACTTGGGATGAGAACTAATGATGAGAATGATGCAAGATTTGCTATCAAAGGTACTCAAAACACCTTCACGGCAAGTCAAATTTTCCAGACCAATAACGCAGGTTTAACTTTAAAAAACACTACAGAGTCTGCGTTGTATTATGAGGGAAGAGATGTAGCAAATAACGTCAGATTCACCCTTGGTAACCTTGGTGCTGGAACAGATGTGACTTTGGCTAATACAAGGCAGAACACTAATATCGTTCTTGGTGCTGGTGCTGTAGGTATTAACAAGTCTCTTCAGGTAACTGGACAGGTTGTTCCTTCAGATTTTGGTAACTTTGATGCAAGATTCTACACTCGTGATGCAGCAGACCAAAGATTTGTTCAGTTGGCAGCGGCTAACACGATTACTGGAAACAACACCTTCAGAGGTACTACAACGTTACTTGGTGATGGTGCAAGATTAACTCTGAAGAACTTGACAAGTGGTAAGGCACTTTACATCGAAGGTCAGAACACAGATGCTTCTATGAAGTGGGCTGTAGGTAACTATGCAGATGGTAGTAGCTCAGTTGTCTTGACAAACATCTCAAATGATACCTATGTGTTGCTTGACAACATGGTTAGGGTGAACAAGAGTCTTGCAATCACTGGACAGGTTCAGCCTACCGATTGGACTAATATTGACTCTCGCTATGTTTTGATTGGTACATATGCTAATCTTGCTAAGAAGAATGAAGCTAACACGTTCACTCTTCAACAAAACATTCAATCAGATGGCGAAGCACTAAGAATCTACAGCAAAGTTCAGAATAATGCTTCTTACATCGTTGGGAAGAATACTGATAACTCTAACAAGTGGTATATTGGTTGTGGTACAAATGGTTCTGGTGTTGCATCTTTCCACAACTACTTGACTGGTGCAAGAATTGATTTGTCTGATGAAGTCCTTTTGTCTAAATCTCTACAGATTACTGGACAGGTAAAACCTTCTGATTGGGGCAACTTAGATGCAAGATTCTTGAAAGTGAGTGGAAGCACAGCGACAGACTTGGTGATTAGTTCTACAGGTCATGGTGCAACAGTTGGTAGAATTATCTCTATTGCTACAAGAGCAGACTGGAACAAGCCTCAAGGCTACTCAGCAATGCTACAGACACCTGCTGCAAGTGTTATCCCAAGCTATCCAGCAGATTCAGCAGCATATCTTCATGTTTTTGCGAAGAGAGATACAGGTGTTGGTCAGTTGGCTTTCTTAGCTAACTACTCAGCAAAAGGTATCTGGCTTGCAAGAAACTTGACAGAAACTGACACAGTAACTTTTGAGAAGATTTACACAGACGGTACTAAGCCAACCCCTTCAGAACTTGGTGCGTACACTAAAGCTGAAGTTGACCAGAAAATTGCATCTGCTGTAACTGACTCAACAGACCTTAAGAAAGTCTATCCAGTGGGGATTGTAACATGGTTTGCAACTAACCAGAACCCTAACACGACTCTTGCAGGTATGACTTGGACGTATCTGAATGAGGGTGTTGGAAGAACAGTTAGGATTGGTGCAGCAAACGGTTCAGATGTTAAATCAGTTGGTGGTGCGGATACTGTGACGTTATCTGTAGGGCATATCCCTTCACACACTCACAGCTTCTCAGCTACAACATCAAGCTTTGACTACGGTACTAAAACATCTAACACAACGGGTGCTCATACTCACTCTGTGAGTGGTTCTGCTGCATCTGCTGGTAGCCATAACCATGCAATCTCGTGGATTGGTCAGAACTCTACACACTATTCTGGTGGTGGTGGTGGTAAGATTGGTACAGGGCCAGGTTATACTGATGCAGGTGGTGCTCACACCCACACAATCTCTGGTACTGCTGCCTCTGCTGGTAACCATGCCCACACAGTAGGTATCGGTGCTCACACCCACACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTCAGTGTTGTAAACCTGTTTATTAGATTGATGGCATGGGTTAGAACGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c203bb68d4f0dbd675e6f633412961c3574945dfd72c84ea942e7875537342d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
EcSzw_1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank