Protein

View in Explore
UniProt accession
S4TU85 [UniProt]
Protein name
Tailspike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIRTTNSCCGNEAGLVEKFIGTAYDVVKTVYENLGELQFIYDFLNKYGVLITVSSVQELQTLPTTAKYTRVYSTSTAGERIYTDYLYVEGDRTGVLPSDPTATGSWVVVGTSTSGGSGSSGGYIPFVYNNGSALGGETTITVPEGTVGVPFIIVGGYTNYVGRGFTYSVADLEVTLAQPLETGDEVVLLLTGVPAVPDNPNVDNWTVINWLYNQGAAVGGEQVIQIPYTFQDIPAVYKNGLRFYKGLTTNSYTIDADNQRIILTEPLATNDRLIVQIGGEVQVVIVSDHTIEEVARTLNIKDSEVILSTDTTQTLNGKKVVYSVTEQFSYGLPTLPTNVYIVSVANGKLVYAPGNVEVDLLPAPYPSLTALAQYKALLASKQGTSNIGHMSPLAASIERSLQLKLADVLNIKDFGAIGDGELHPLSEKFSTLSAAQMVYPFVTDLSQSQDYAGTQAAIIAAKIGYAVFAPSGEYEINKTVLADYALCMYGEGAQGLRTVDSTMHSPSPVRGTVFNSHVSTGRMLSVDSGSAYSFGLTLRDFAIWGVDGQCDVGLYLNGIGWMGIVEGINIQFFPNQALEIGYIQDTYFTNCSFLQSGNVNNPAVTMIQDSNYVYFTGCHFELTPYMIKFGNPWFVFFNHCHFEVARPVSDGSTAADRFYYTKAPIDLGTSYRVFFNNNVFIPTDVEYLASKLSVPRKDVPYFITGSGSVMSFTGDTFMAPEGTIKSAYLSGTDIDFNGVKFIRCDPSNFGLYVQNGKVNGCSYGIDVTADAVNLNGIKVVTGSISNTKFGFYESDSHGKRTAGGLIIGGAHCVGNELPVDSRINIYVDSGATVNGFDGGKPFFVDITDAGDIDLTKLHPAANLRITGAAVSIYHVYGSPYGRDLMIASNTTDGIVKFAMNNLIPKGSVDYAIPQYHHTLWRCIDDGTATMYQIS
Physico‐chemical
properties
protein length:934 AA
molecular weight: 100890,41240 Da
isoelectric point:4,76677
aromaticity:0,11135
hydropathy:0,03683

Domains

Domains [InterPro]
DC_0041
STR
50–204
DC_0041 G3DSA:3.30.2020.50 DC_1709
G3DSA:3.30.2020.50
ATT
284–364
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
450–781
IPR011050
S4TU85
1 934
Architecture
STR
ATT
STR
STR 50-204 | ATT 280-364 | STR 366-932 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
S4TU85
1 934
Domain Start End Length (AA) Confidence
N-terminal 1 448 448 0,9976
Central domain 449 841 394 0,9925
C-terminal 842 934 92 0,9714
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-448
Central
449-841
C-terminal
842-934

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage FSL SP-076
[NCBI] 		1173762 Uroviricota > Caudoviricetes > Schitoviridae > Ithacavirus > Ithacavirus SP076
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enterica subsp. enterica serovar Dublin
[NCBI] 		98360 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF88392.1 [NCBI]
Genbank nucleotide accession
KC139520 [NCBI]
CDS location
range 55517 -> 58321
strand -
CDS
ATGATTCGAACTACGAATTCATGCTGCGGTAATGAAGCTGGTCTGGTGGAGAAATTCATTGGTACTGCTTATGACGTAGTAAAGACTGTTTATGAAAATCTCGGTGAACTTCAGTTCATCTATGATTTCTTAAATAAGTATGGAGTACTTATTACCGTTAGTTCTGTACAGGAGTTACAGACACTACCTACAACTGCTAAATACACAAGAGTCTATTCCACCTCTACTGCTGGGGAACGAATTTATACAGATTATTTGTATGTAGAAGGTGACCGTACTGGAGTATTACCAAGTGACCCTACTGCTACTGGTAGTTGGGTAGTTGTTGGTACTTCTACTTCAGGGGGTAGTGGTTCCTCTGGTGGGTACATTCCATTTGTATATAACAATGGTTCAGCCCTTGGGGGAGAAACTACTATTACAGTTCCTGAAGGTACTGTAGGTGTTCCATTTATTATTGTAGGTGGATATACCAACTATGTAGGAAGAGGGTTTACCTATTCTGTAGCTGATTTGGAAGTAACTTTAGCTCAACCATTGGAAACTGGTGATGAAGTAGTATTACTTCTGACTGGTGTCCCTGCTGTACCTGATAACCCTAATGTGGATAATTGGACTGTTATTAACTGGCTATATAACCAAGGTGCAGCAGTAGGTGGTGAGCAGGTAATTCAGATTCCTTACACCTTCCAAGACATTCCTGCTGTATATAAGAATGGTTTGAGATTCTATAAAGGACTCACTACTAATTCGTATACTATTGATGCTGATAACCAACGAATCATTCTTACTGAACCATTAGCTACCAATGACCGTTTGATTGTTCAGATTGGTGGTGAAGTTCAGGTAGTAATTGTATCTGACCATACTATCGAAGAAGTAGCACGTACCCTTAATATTAAAGATTCTGAGGTAATTTTAAGTACAGATACTACTCAGACTCTTAATGGTAAAAAAGTTGTTTATTCTGTAACTGAACAGTTTTCTTATGGATTACCAACTTTACCTACCAATGTATATATAGTTAGTGTTGCAAATGGTAAGCTTGTTTATGCACCAGGCAATGTTGAAGTAGATTTATTACCTGCACCTTATCCGTCACTCACTGCACTTGCTCAGTATAAGGCGTTACTTGCGTCTAAACAGGGTACATCTAATATTGGGCATATGTCTCCATTAGCTGCATCAATTGAGCGCAGTCTTCAACTCAAATTGGCAGATGTTCTTAATATTAAGGACTTTGGTGCAATTGGAGATGGAGAGTTACACCCATTAAGTGAGAAGTTCAGTACTCTGTCTGCTGCACAAATGGTTTATCCATTTGTAACTGACTTATCTCAGAGTCAGGATTATGCAGGTACTCAGGCAGCAATTATCGCAGCTAAAATAGGTTATGCTGTATTTGCTCCTTCCGGTGAATATGAAATTAATAAAACTGTATTAGCAGATTATGCTTTATGCATGTATGGCGAAGGTGCTCAAGGCTTGAGGACTGTAGACTCTACAATGCATTCTCCCTCTCCTGTACGTGGTACTGTATTCAATTCCCATGTATCAACAGGTCGAATGCTATCTGTAGATTCTGGTTCAGCATACAGTTTTGGTCTTACCTTGCGTGACTTTGCTATTTGGGGAGTTGACGGTCAATGTGACGTTGGTTTGTACCTTAATGGTATTGGTTGGATGGGTATTGTTGAAGGTATCAATATACAGTTCTTCCCTAACCAAGCATTAGAAATCGGGTATATTCAAGATACATATTTTACTAATTGTTCATTCTTACAAAGCGGTAATGTTAATAATCCTGCTGTAACTATGATTCAAGATAGTAATTATGTTTATTTCACAGGTTGTCATTTTGAACTTACTCCTTACATGATTAAATTTGGAAATCCGTGGTTTGTATTTTTTAACCACTGTCATTTTGAGGTTGCTAGACCTGTCAGTGATGGTTCTACTGCTGCTGACCGATTCTATTATACGAAGGCTCCTATTGACCTTGGTACTAGCTATAGAGTTTTTTTCAATAATAATGTATTTATTCCTACTGATGTTGAGTATCTTGCATCTAAACTATCTGTGCCTCGCAAGGATGTTCCTTATTTCATTACTGGCTCTGGTAGTGTAATGAGTTTTACTGGAGATACATTTATGGCTCCAGAAGGCACAATTAAATCAGCATATTTATCAGGTACAGATATTGATTTTAATGGTGTTAAATTTATTCGCTGTGACCCATCTAATTTTGGGCTATATGTTCAAAATGGTAAGGTAAATGGATGTTCTTATGGTATCGATGTTACTGCTGATGCAGTAAACCTAAATGGTATTAAGGTAGTAACTGGGTCGATATCTAATACCAAATTTGGATTCTATGAGTCTGATTCTCACGGAAAGCGTACTGCTGGAGGACTTATTATAGGTGGTGCACATTGTGTCGGTAATGAGTTACCTGTTGATTCTCGTATTAATATTTACGTGGATTCTGGTGCTACAGTTAACGGGTTTGATGGTGGTAAACCATTCTTTGTTGATATTACCGATGCTGGAGATATTGACTTAACTAAGCTTCACCCTGCTGCAAATCTTCGCATTACTGGTGCTGCTGTAAGTATTTATCACGTGTATGGTTCACCTTATGGTAGGGACTTAATGATTGCATCCAATACAACCGATGGGATTGTTAAGTTTGCTATGAATAATTTAATACCAAAAGGGTCTGTGGACTATGCAATACCTCAGTATCACCATACACTGTGGCGATGCATTGACGATGGTACGGCAACTATGTACCAAATTAGTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
252fd231ef8afc2f3bc20542e022250318a73130ca03b480648f8a83dedb7936
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50