Protein

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Genbank accession
AYD80158.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MAFISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPLIHLINRDEYERYYAVFTGSTIRVFDLAGNEKQVRFPSGAAYVQTANPRNDLRMVTVADYTFVVNRNVTVTESTEISTGGNFRDKGDALINVRGGQYGRTLKVLINGTVYASYTIPNGSAPEHVNNTDAQWLANELAKNLRNTLGPHGWTFNVGQGFIHVIAPANGEIVNISTEDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDSSKSADQYYVQYDASRKVWKEVVGWNTKLHYTHATMPHALIRASDGNFEFQTISWNPRVCGDADTNPYPSFVGSTINDVFFFRNRLGFLSGENIILSRTAKYFNFFPASVANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGANVQVLACQSINSDMFIILRNEFNTFLARVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTYETSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNNDPWLRLSGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 88900,40320 Da
isoelectric point:6,06423
aromaticity:0,12060
hydropathy:-0,31332

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
AYD80158.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYD80158.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9912
Central domain 139 349 212 0,3927
C-terminal 350 796 446 0,2174
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-349
C-terminal
350-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage N30
[NCBI] 		2340719 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD80158.1 [NCBI]
Genbank nucleotide accession
MH717098 [NCBI]
CDS location
range 23394 -> 25784
strand +
CDS
ATGGCATTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTTCTCAAGACGCTGGGAGGAAGTGGTGACTTGGGACAAGCACCTTTAATTCACCTGATAAACCGTGATGAGTACGAGCGGTACTACGCAGTGTTTACCGGAAGTACCATCCGAGTTTTTGATTTAGCTGGTAACGAGAAACAAGTGCGTTTCCCTTCAGGGGCAGCGTATGTACAGACAGCTAACCCAAGGAATGACCTTAGGATGGTAACAGTTGCAGACTACACGTTTGTCGTTAACAGAAACGTCACAGTAACCGAGTCAACCGAAATTTCAACTGGTGGTAACTTTCGGGATAAAGGTGACGCTCTGATTAACGTGCGAGGTGGTCAATATGGAAGAACATTGAAGGTTCTGATTAATGGTACAGTATATGCATCATACACAATCCCCAACGGGTCCGCTCCAGAACACGTCAATAACACAGATGCTCAATGGCTTGCTAACGAGTTGGCTAAAAATCTTAGGAACACCCTAGGACCCCACGGGTGGACATTCAACGTTGGTCAAGGGTTCATTCATGTGATAGCTCCTGCCAACGGCGAGATAGTCAACATATCAACCGAGGATGGATACGCAGACCAGCTAATTAACCCCGTCACGCACTACGCTCAGTCGTTCTCTAAGTTGCCACCAAACGCTCCAGACGGCTACATGGTTAAGATTGTTGGAGATTCCTCAAAGTCCGCTGACCAGTATTACGTTCAGTATGATGCCAGTCGTAAGGTATGGAAGGAAGTTGTTGGGTGGAACACCAAGCTGCACTACACTCATGCTACGATGCCTCACGCTCTCATTAGGGCCTCTGATGGTAACTTTGAATTCCAGACCATCTCGTGGAACCCTAGGGTGTGCGGTGATGCTGATACTAACCCGTATCCTTCATTCGTAGGCTCTACGATTAATGATGTCTTCTTCTTCCGTAACCGTTTAGGATTCCTTAGCGGAGAGAATATCATATTGAGTCGTACTGCAAAATACTTCAACTTCTTCCCAGCGTCGGTTGCTAACCTAAGTGATGATGACCCTATCGACGTAGCTGTGAGTACCAACCGAATCGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGACGAAGCACAGTTCGTTCTTACAGCGTCAGGCACCCTTACATCAAAGTCAGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTTTGGGATTGGACGAAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGATACTATGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCACACGTTCCTAACTACATTCCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACCGAAAACTTCTGTTCTGTACTATCTCACGGGGACCCTAGCAAAATCTTCATGTACAAATTCCTGTACCTTAACGAAGAGCTAAGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGCAAACGTGCAGGTTTTGGCATGTCAGAGCATCAACTCAGATATGTTCATTATTCTACGTAACGAGTTCAATACGTTCCTTGCGAGAGTTTCCTTTACGAAGAACGCCATTGACTTACAGGGAGAACCATATCGGGCCTTTATGGATATGAAGATTCGCTACACGATTCCAAGCGGAACGTACAACGATGACACCTACGAAACTTCCATTCACATACCAACCATTTATGGTGCTAACTTCGGGAGGGGCAAAATCACTGTATTGGAGCCTGATGGTAAGATAACCGTATTTGAGCAACCAACTGCTGGGTGGAACAATGACCCATGGCTGAGGCTTAGTGGTAACTTAGAGGGACGAACGGTATACATTGGGTTCAATATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGATGGGTCAACCTCAACGGAAGACATTGGTCGCTTGCAGTTACGCCGAGCGTGGGTTAACTATGAGGAGTCTGGTACGTTTGACATTTATGTTGAGAACCAATCATCCAACTGGAAGTATACGATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGAGATTGAACTTAGGGACAGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACCGTGTCTATCTTGTCTGACGAGACTACCCCGCTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9368b22a28508edbab745fdb332ea421e5d4f031505d80aa303e3a6223ecb14
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Distribution characteristics of Escherichia coli phages in piglets intestinal isolated from Jiangsu and Anhui province Lin,Y., Zhou,B., Luo,J., Hua,J. and Zhang,M. 2014-08-20 — GenBank