Protein

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Genbank accession
YP_009833910.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MRASLISVLLNLFSDNEVIEVKSYRAGSGIGGGKFAFIKADKTSTDDGGATIVATDGSRWKRVFDNAGVINPTFWGAAPNDNSIDSGPAFTRMSKWSETVPFTNDTTRSINGNIKMECNPGRYFIKTTITLQTKTIDYDFSGAILDFTLMTPGTAAAPVYGISWVNLRGYTQGTMECRNLRAVGPGMDKYVHFMGMNDTFAYFWAQNSMCFMGGGCDLFSTGFTYSSNTYYVKFFNYQFNHCNICYTNNATMTNSGEQIHFISCIFSQSNYFINVNKAHTIFDNCSFDYAYKRYVLVDSGSARLIFNDGWFEGEGPYEYAFEVKDGLNANIVFNGVNFIFRASNTKAKSNVFFAGDRCVMSFDKCYFSNLGISNDDPAITGWVSGKGTVTFRDSKLPHNGPPLALTSIQPEVPEENYIRSEIFSDVSHYAHEVWIPSPGGTGCEIRKNRVGWGTAGSTNFSIQRLNGYMQVGTNTVPKDGTYQLYIGSMPLKGNGPVIARVNLSSWASSGTISIRVVYMAAEFFGPDDERSPIVYKSVVGGGYDLQLNGPGSSIKTYETPLNIQGYDGQPLSFTAIPDWASHAAFMIDITRAPMNMAHRINSIYMRQI
Physico‐chemical
properties
protein length:608 AA
molecular weight: 67216,85560 Da
isoelectric point:6,32808
aromaticity:0,13487
hydropathy:-0,20493

Domains

Domains [InterPro]
IPR059934
RBD
14–65
IPR059934
DC_1407
STR
30–531
DC_1407
YP_009833910.1
1 608
Architecture
RBD
STR
RBD 14-29 | STR 30-531 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009833910.1
1 608
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,9822
Central domain 86 422 338 0,9917
C-terminal 423 608 185 0,9586
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-422
C-terminal
423-608

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_ 2050HW
[NCBI] 		2024252 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus mv2050HW >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009833910.1 [NCBI]
Genbank nucleotide accession
NC_048668 [NCBI]
CDS location
range 179344 -> 181170
strand -
CDS
TTGAGAGCGTCTCTGATCTCCGTACTACTAAACCTATTTTCGGATAACGAAGTTATTGAAGTTAAAAGTTATCGTGCAGGTTCAGGTATCGGTGGCGGTAAGTTTGCCTTTATTAAGGCGGACAAAACTTCTACCGATGACGGCGGTGCAACTATTGTTGCCACAGATGGCAGTCGCTGGAAACGTGTATTTGATAACGCTGGTGTAATCAACCCTACGTTCTGGGGCGCTGCGCCTAACGACAACAGCATCGACTCTGGCCCTGCATTTACCCGGATGTCCAAGTGGTCTGAGACTGTTCCGTTTACTAACGATACGACTCGTTCGATTAACGGTAACATTAAGATGGAATGTAATCCTGGTCGGTACTTTATCAAGACTACGATTACGCTTCAGACCAAGACAATCGATTACGATTTCTCTGGAGCCATCCTCGACTTTACCCTGATGACCCCAGGCACTGCAGCAGCGCCTGTATACGGCATTAGCTGGGTTAACTTGCGAGGTTATACCCAAGGTACCATGGAGTGTCGTAATCTCCGTGCGGTCGGCCCTGGGATGGATAAGTACGTACACTTCATGGGAATGAACGACACCTTCGCTTATTTCTGGGCACAGAACTCCATGTGCTTTATGGGTGGCGGTTGCGATCTGTTCTCCACTGGGTTTACCTATAGCTCCAATACGTACTACGTCAAGTTCTTCAACTACCAGTTCAACCATTGTAACATCTGCTACACCAACAATGCTACAATGACTAACTCCGGGGAACAGATCCACTTCATCTCCTGTATCTTCTCCCAGTCGAATTACTTCATCAACGTTAACAAAGCACACACGATCTTTGACAACTGTTCTTTCGACTATGCGTACAAACGTTACGTCTTAGTAGACAGTGGTTCGGCTCGTTTGATCTTTAATGATGGATGGTTCGAAGGCGAGGGTCCTTACGAGTATGCTTTCGAAGTGAAAGACGGACTCAATGCCAATATCGTGTTCAACGGCGTTAACTTCATTTTCCGCGCATCCAATACGAAGGCTAAGAGTAACGTCTTCTTTGCAGGTGATCGCTGTGTGATGTCGTTCGATAAATGCTACTTCAGTAACCTGGGTATTAGTAACGACGACCCTGCAATTACTGGTTGGGTATCGGGTAAAGGTACAGTTACCTTCCGCGATAGTAAGTTGCCGCATAACGGCCCGCCGTTGGCATTGACCTCGATTCAACCTGAAGTCCCTGAAGAGAACTACATCCGTTCAGAGATCTTTAGCGATGTGTCTCACTACGCACACGAAGTTTGGATCCCATCTCCGGGCGGTACGGGTTGTGAGATTCGTAAGAACCGAGTGGGCTGGGGTACTGCCGGGTCTACTAACTTCTCCATCCAGCGCCTTAACGGTTACATGCAGGTAGGTACCAACACTGTACCTAAAGACGGGACGTATCAACTCTATATCGGTTCTATGCCTCTCAAAGGTAACGGTCCGGTAATCGCTCGTGTCAACCTAAGTAGCTGGGCATCTTCTGGTACGATTAGTATTCGCGTAGTCTACATGGCAGCCGAGTTCTTCGGCCCAGATGATGAGCGTTCACCTATCGTTTACAAGTCGGTAGTTGGTGGCGGTTACGACCTTCAGTTGAACGGACCAGGGTCCTCTATCAAGACTTACGAGACTCCGCTTAACATCCAAGGTTACGACGGACAACCGCTTTCCTTTACTGCGATTCCTGACTGGGCGTCCCATGCAGCGTTCATGATTGACATCACTCGGGCACCAATGAACATGGCTCATCGGATCAACAGTATCTATATGAGGCAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e70d0e2912c26cef3dde902cc84082b796260088e3bb0fc2679cf98ac5fb9e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7157
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50