Protein

View in Explore
Genbank accession
ACY75902.1 [GenBank]
Protein name
conserved hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVNFPNSPSTNDTHTENGYTWKWDGTTWIIQSLAPPGPTGPSGPSGPSGPSGPSGPPGPPGPTGGSGSSTFVGLTDTPSTFTADKFVKVNSSGNALEWTDAPTNGLPIVNVADFGALPGASGATNRTSIEAAINSLASTGGLVYIPTGTYDITGTILIDQGVMGDGGGVSIIGPTQNYRITAADTEGVCLRSTDAGSDIIKVNNVRNVTFANLAFDHKEGTSRTGGNAVHFYSNVNTQQIRMDRIYIRRQFGAIKVDGHSIATFRDIEIRDIVNEGGSFGMLFSASAGGSERQDQIRCENVIIDGVISGSPHTSAVGLWVKDFVNSIWFLNCAVLRCNKGFLMDSTVPSGSTGNPGSFFRINDCDFDTNNSYGIEIAGGSFIWINNPYISSNFVNGLRVSSTFTGVLRVNAADCRGNRQHGIYIDSQDHKKIFIRDSQCSNNSATNTNQYDGLAFYDSNGTNQSDIHIDGGQYGGDIMGSTDGGNSTSTPQRYGIAAVNNSKYDRVTINNVDCTGNRTGTVQFNPNNGSDNYIHNVIGFHGTHSGAH
Physico‐chemical
properties
protein length:548 AA
molecular weight: 57859,70820 Da
isoelectric point:5,31202
aromaticity:0,08577
hydropathy:-0,34836

Domains

Domains [InterPro]
DC_2298
STR
3–107
DC_2298 IPR011050
IPR012334
STR
110–547
IPR012334
ACY75902.1
1 548
Architecture
STR
STR 3-547 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACY75902.1
1 548
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,8686
Central domain 120 537 419 0,9889
C-terminal 538 548 10 0,3367
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-537
C-terminal
538-548

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM2
[NCBI] 		268746 Uroviricota > Caudoviricetes > Pantevenvirales > Salacisavirus > Salacisavirus pssm2
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75902.1 [NCBI]
Genbank nucleotide accession
GU071092 [NCBI]
CDS location
range 24599 -> 26245
strand +
CDS
ATGGCAGTAAATTTTCCAAATAGTCCTTCAACTAACGATACCCACACCGAGAACGGTTATACATGGAAGTGGGATGGAACTACTTGGATAATTCAATCTCTTGCTCCTCCAGGTCCTACAGGTCCAAGTGGTCCATCAGGTCCAAGTGGTCCAAGTGGTCCTAGCGGTCCTCCAGGTCCTCCAGGTCCAACAGGAGGTTCTGGGTCTTCTACTTTTGTAGGTTTAACAGATACACCATCTACCTTTACTGCTGATAAGTTTGTAAAAGTAAATTCTAGTGGTAATGCTTTAGAATGGACTGATGCTCCTACTAATGGATTACCTATAGTTAATGTTGCAGATTTTGGAGCACTTCCAGGTGCTAGTGGAGCAACAAATAGAACTAGTATTGAAGCAGCAATTAACTCATTAGCATCTACGGGAGGATTGGTTTATATTCCTACAGGAACTTATGATATAACAGGAACTATATTAATAGATCAAGGTGTTATGGGTGATGGTGGTGGTGTAAGTATCATCGGTCCAACTCAGAATTATAGAATTACTGCTGCTGATACTGAAGGAGTTTGTTTGAGATCTACTGATGCTGGTAGTGATATAATAAAAGTAAATAATGTAAGAAATGTAACTTTTGCCAATCTAGCATTTGATCATAAAGAAGGCACATCTAGAACTGGTGGAAATGCTGTTCATTTTTATTCTAATGTGAATACTCAACAGATTAGAATGGATAGGATTTATATCCGAAGACAATTTGGTGCTATTAAAGTAGATGGGCATTCAATCGCAACATTTAGAGATATAGAGATTAGAGATATTGTAAATGAAGGTGGTTCCTTTGGAATGTTATTCTCTGCTTCTGCTGGTGGATCAGAAAGACAAGATCAGATAAGATGTGAGAATGTTATTATTGATGGTGTGATTAGTGGAAGTCCACATACATCGGCAGTAGGATTATGGGTTAAAGATTTTGTAAATTCAATATGGTTCCTTAATTGTGCTGTTCTTAGATGTAATAAAGGATTCTTAATGGATTCAACTGTTCCTAGTGGATCAACAGGTAATCCTGGTTCATTCTTTAGAATAAATGATTGTGATTTTGATACAAATAATTCATATGGTATTGAGATTGCTGGTGGTAGTTTCATTTGGATTAATAACCCATATATAAGTAGCAATTTCGTTAATGGTTTGAGGGTTAGTAGTACTTTTACGGGTGTATTAAGAGTAAATGCTGCTGACTGTAGAGGTAATAGACAGCACGGAATTTATATTGATTCACAAGATCATAAGAAGATCTTTATAAGAGATTCGCAGTGCTCTAATAATTCTGCAACTAATACTAATCAATATGATGGTCTTGCTTTTTATGATTCTAATGGAACTAATCAATCAGATATTCATATTGATGGTGGACAGTATGGTGGAGATATAATGGGATCAACTGATGGTGGTAATAGTACTAGCACACCTCAAAGATATGGTATAGCAGCAGTTAATAACTCAAAATATGATAGAGTTACTATTAATAATGTAGATTGTACTGGAAATAGAACTGGTACAGTTCAATTTAACCCTAATAATGGATCTGATAATTACATTCATAATGTTATCGGATTCCACGGAACACATTCAGGTGCTCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bfa3bbbfadd1a244bca080d8f3cc98e965bbaa162b2e9c32b1a397bf5bc27b56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank