Protein

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Genbank accession
UNY42433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMVPSANPTQWRPVLDLTAASAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVATEILHINWDANNASQWARTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTAAELGINQDFIPMDGSDSIRGNLGTIGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47196,39190 Da
isoelectric point:7,01617
aromaticity:0,07883
hydropathy:-0,13581

Domains

Domains [InterPro]
DC_0043
STR
1–443
DC_0043
cd19958
STR
147–216
cd19958
UNY42433.1
1 444
Architecture
STR
STR 1-443 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UNY42433.1
1 444
Domain Start End Length (AA) Confidence
N-terminal 1 222 222 0,6776
Central domain 223 421 200 0,0445
C-terminal 422 444 22 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-222
Central
223-421
C-terminal
422-444

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_IntR
[NCBI] 		2924892 No lineage information
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UNY42433.1 [NCBI]
Genbank nucleotide accession
OM313460.1 [NCBI]
CDS location
range 29953 -> 31287
strand +
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCAGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTAGAGGCTGGGGTGCAACCCTTGGGTACTCGGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATCGGTAACCGTACTGACAAAGGTATCCACTACATCCTACAGCAGGGTGTTGATGTATGGGTGGAAACTGAGACCTACCCGGTTGGCGCACTGGTTAAAGTTAACGCTGACAATATGCTGTACCGTTGTCTGGTGCAAAATATTAACATGGTACCGTCGGCTAACCCTACGCAGTGGCGTCCTGTACTTGATCTGACCGCTGCGTCTGCTGCTGCACGACAGGTTGGTAAAGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGCTTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCATCAGGCACAGGCGGGCCTACTAACGGCGTTGCGACTGAGATTCTGCACATCAACTGGGATGCTAATAACGCTTCACAGTGGGCACGAACCAAAGGTAAGCGCGTAATTGCTATGCGTGAGAAGGTTAACAATACCTGGGGTGGCTGGTCATACTCTTACGGGCCTGACAATAAACCTACGGCTGCTGAGCTGGGTATTAACCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGTGGTAACTTAGGTACTATTGGCTGGTTGCATATTGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCCGCTGGTGTAGGTACTGTCGAGTATTCTGGTAACATCGCAGGTGGTACTGCTGTTCAGGAGTTGCTGACTTCAGTTTCTGTCGCGGCTAACAGTAATGTTGTCACTGCTGCTCGCTGGGGATCTGTACCTATGTCGCACATCCAGCACATCCTTGTGGCTGGCGGTGCTACACAGATTAACATGGCGGTATGTCGCCCTGGTGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTGGATGGTCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGTGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCCGAGTCAACATTCTACCCGGGCCATGTAATGACTGGCTGGCGCTTCGGTAATAAGAAAGAGCTGCGCGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4fa134aa490d151fb60ce7d5cc36dbde3a8c0176f45c9a271eefc76e64859a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of vB_EcoM_IntR phage Alexyuk,M., Bogoyavlenskiy,A., Alexyuk,P., Moldakhanov,Y. and Berezin,V. 2022-07-25 — GenBank