Protein

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Genbank accession
YP_009831569.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKAGTTVGGNTIWSQANLPVLPSGNTLTYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKAGDDMTGSLNITGQNSQLTVPYRLLMQRAVAGDPYVLFVRPDNNPLTNGYPSTTLRVMTITARAATTADPVSGAQLANILSDQTAQGNGSLTLQAFAAPNTSTGASGARTAEVYLNGNGQLSMTGSGLTIGMQTIVNGTIFGTQMAIKGDSNRNLFFQDSGDNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGVATFNGQAVMNSRLSVSTDYDTQGANSAVLRVDTSGDGNGVGDGVTHLGYKDSNGKFNHYFRGTGTLHVNTKLGMNINVPSYYNDVPQTTPAQYFLSTGTQGGKNYLRQFRGGNADTIWHETVQGGVWRLATGSTDAQEELQVSTAGYCRTRQEFQSTAVKGDGGQFRAVAGNYGFIIRNDGGSTYFLLTDSGDPYGSWGSLRPITISNGNGVVSIANGANINGSVNFGNAVNFNGTVETNGIGCGTPNGLGTTGISLGDNDTGFNQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRSGDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELRDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDIDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:743 AA
molecular weight: 78891,39140 Da
isoelectric point:5,35534
aromaticity:0,07672
hydropathy:-0,32423

Domains

Domains [InterPro]
DC_1159
STR
1–419
DC_1159 IPR048390 G3DSA:6.20.80.10 IPR030392
DC_1202
STR
364–743
DC_1202
IPR048388
ATT
572–642
IPR048388 IPR030392 Coil
YP_009831569.1
1 743
Architecture
STR
ATT
STR
ATT
STR
STR 1-426 | ATT 427-474 | STR 475-571 | ATT 572-642 | STR 643-743
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009831569.1
1 743
Domain Start End Length (AA) Confidence
N-terminal 1 456 456 0,1421
Central domain 457 655 200 0,2463
C-terminal 656 743 87 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-456
Central
457-655
C-terminal
656-743

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_leE
[NCBI] 		1873954 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus lee
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831569.1 [NCBI]
Genbank nucleotide accession
NC_048646 [NCBI]
CDS location
range 174823 -> 177054
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTCGGCGGTAATACTATCTGGAGTCAGGCAAATTTGCCTGTTCTCCCGTCTGGAAATACTTTAACATATAAAGGCTTTAAGGTATACACAGAAAACGACAAACCAACAAAAGCCGAAATCGGATTGGGTAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGCGACGATATGACCGGATCGTTGAATATTACAGGTCAGAATAGTCAACTAACTGTTCCTTATCGTTTGTTGATGCAGCGCGCGGTTGCTGGCGATCCATATGTTTTGTTTGTTCGTCCAGATAACAACCCACTTACTAACGGATATCCGTCTACAACGCTTCGTGTGATGACTATCACTGCCCGTGCTGCAACAACTGCTGATCCTGTTTCCGGCGCACAACTGGCAAACATTTTGTCAGATCAGACAGCACAGGGTAACGGGTCATTAACTCTGCAAGCGTTTGCAGCCCCGAACACGTCTACAGGTGCAAGCGGTGCGCGTACAGCGGAAGTCTATTTGAACGGTAACGGTCAGTTATCAATGACAGGTTCCGGTTTAACAATCGGGATGCAGACCATTGTAAACGGTACGATTTTCGGTACACAAATGGCTATTAAAGGCGATTCAAACCGAAATCTGTTCTTCCAGGATAGCGGCGACAACGAATTGAGTTTGATTTATGCTGATACCGGAAAGAACTTGTATGTTCGTACTGGTGGTGGTGCATATGCAACTCGTTTTGCTTCTGATGGAACTTTAGTTCTTGCCAATCATCTAACTGTTCCTGGTGTAGCTACATTTAACGGTCAAGCGGTAATGAATAGCCGTTTGTCGGTGTCTACTGATTATGACACTCAGGGGGCTAACAGTGCGGTTCTTCGTGTAGATACAAGCGGTGATGGAAACGGGGTTGGTGATGGTGTAACCCATTTAGGATATAAAGACAGTAACGGGAAATTTAACCATTATTTCCGTGGTACTGGTACATTACATGTTAACACCAAACTTGGTATGAACATCAACGTACCCTCTTATTATAACGATGTACCGCAAACCACACCAGCACAATATTTTTTGTCAACTGGTACACAGGGCGGGAAAAACTATTTGCGTCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTGTGTGGAGACTGGCAACAGGTTCTACCGACGCACAGGAAGAATTACAGGTTTCAACTGCTGGTTATTGTCGTACTCGTCAGGAATTCCAAAGCACAGCAGTAAAAGGCGACGGTGGACAATTCCGAGCGGTTGCTGGCAACTACGGTTTCATTATCCGTAATGATGGTGGTAGCACTTATTTCCTTCTGACAGATTCAGGCGATCCATATGGTTCATGGGGTTCATTACGCCCTATTACAATCAGTAACGGTAATGGTGTTGTTTCTATCGCAAACGGCGCGAACATTAACGGTTCTGTTAACTTTGGCAACGCGGTAAACTTCAACGGCACGGTCGAAACAAACGGTATTGGTTGTGGTACGCCAAACGGATTGGGTACGACTGGTATTTCTCTGGGTGATAACGATACAGGTTTCAACCAGGAAGGTGATGGTATTCTCAACGCCTATGCAAATAGCCAGCGTATTATGCGATGGACTACGGGGGCGACTGCTAACTATAAACAGTTACAGGTTCAGGGTGTTAACGGGCCAGCATTACTTCTGAATAACACAGCGACTAACCAATCGTGTTATTTGCTTATTACTTTGGCAGGTAACAACGGTGCATACTTTGGTTTCGGTGGTGCTGACGATAACGTATCAGTTCACAACTACCGACTGAATACAACCCTACAATTGCGTAGCGGTGATTTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCCGATATTCGACTGAAATCGAATTTAGTTGAACTGAGAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTACATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTGTACCATCGTGAATCCGGTTTGATCGCTCAGGATGTTGAGAAGGTATTGCCGGAAGCAGTGCGCGAAGACATCGACACTGGTATGTTAACCATTTCACCTTCGGGAATTAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ccbf2c413a4bc6fb5aaf1dd2771708cd02c6812f4bb814842466ca9fa5b26f95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6277
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50