Protein

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Genbank accession
XSG66671.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MNFVVNNVPDGVPIRIFIDEICEDNDVTEDFDALKEDAIFYIVESAGGGVVKGVMKIFSVILKPLAKLLSPSAKGLSSNFANSQADSPNNSLTDRNNKPRPYERSYDICGTVQTVPNNLMTTYKIFNDTGRIIEYGYYDAGRGHLDIKAEDVTEGDTRVQDIDGSSVAIYAPYTSPNNTSTPQLQIGEVIDQQLYTTIESNEIDGITLRAPNDLGVTFSGETAVVTLSGTTGRITETAGGVDFTEDFSVGDIANLNAWTTNTVNIGDHYTVTSVSETVIELDVSSRLLSWSSASGNPIRGSDGENSIRPTDTLDKTLTDWVSINRSTVERIVVNIAAPNGMYKDNGSKLTMSATAEVQYQALDESGAPFGPIYTATGTITGRSSDYNGVTIYGYLPTASRVRVRARRTSDTDRGFNGTVSDEIVYANLYGQSVDTTPHYGNRTTVHSARKQTPRATEVRQPQLRMIATEMVFKYLGGGVFDTVMTPNRQAVQSLIRLARDPVVGGLDLSVANMDALLETQEEVESYFGSSDAGEFCYTFDDYKTTMQEIVTIIAEAIFCTPYRKGADILLDFERPRLGPEMVFTHRSKVKTSEKWSRTFNDPQVFDSLKFSYIDPVTNVKGTISIPETGGLKTETYDSKGVRNKKQAYWLAHRRHQKNILRKVNVSFTATEEGIFARPNRPISVVKGSRMATYDGYITSVDGLTVHLSSPVQFTAGEPHSLVLKTRDGGAQSIPVIEGPDNRSVIMLSVPQEAIYTGNSALKTEFSFGSDSRHAAQMIMVSTVEPSDDRTVRITGFNYDADYYKYDGVSPFGRAFSDGFSNGFS
Physico‐chemical
properties
protein length:824 AA
molecular weight: 90389,59230 Da
isoelectric point:4,98691
aromaticity:0,08859
hydropathy:-0,34976

Domains

Domains [InterPro]
DC_0118
STR
1–657
DC_0118 DC_0808
NF040662
Unmapped
326–804
NF040662
XSG66671.1
1 824
Architecture
STR
RBD
STR 1-657 | RBD 675-818 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSG66671.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,9741
Central domain 202 400 200 0,5278
C-terminal 401 824 423 0,1865
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-400
C-terminal
401-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SaI_NFG_5579
[NCBI] 		3420192 Viruses >
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSG66671.1 [NCBI]
Genbank nucleotide accession
PV593526 [NCBI]
CDS location
range 15708 -> 18182
strand -
CDS
ATGAATTTTGTAGTAAATAATGTGCCTGATGGGGTTCCTATTCGCATATTTATTGATGAAATATGTGAAGATAACGACGTAACAGAAGATTTTGATGCGTTAAAAGAAGATGCAATATTTTATATTGTTGAGTCTGCGGGGGGTGGCGTTGTAAAAGGGGTAATGAAAATATTCAGCGTCATCCTTAAACCACTTGCAAAGCTTTTAAGCCCATCGGCAAAAGGCTTATCTTCTAATTTTGCAAACTCGCAGGCGGACTCGCCAAACAATAGCCTTACAGACCGCAACAATAAGCCACGACCATATGAGCGCAGTTATGACATATGTGGCACGGTACAAACCGTACCGAACAATCTTATGACAACGTACAAAATATTCAATGATACGGGCCGCATCATTGAATATGGGTATTATGACGCCGGGAGAGGTCATCTCGATATAAAAGCTGAAGATGTTACTGAAGGGGACACGCGGGTGCAGGATATTGACGGGTCGTCCGTCGCGATATACGCCCCGTACACATCACCTAATAACACATCAACACCACAGTTACAGATAGGAGAGGTTATAGACCAGCAGTTGTACACCACTATAGAGTCCAACGAGATAGACGGCATAACGCTTAGGGCCCCAAATGATTTAGGCGTAACATTCAGTGGAGAGACGGCAGTAGTTACGTTGTCAGGAACAACAGGAAGAATAACAGAAACTGCCGGTGGTGTTGACTTCACAGAAGATTTTTCTGTAGGCGATATCGCTAACTTAAATGCCTGGACAACTAACACCGTTAATATAGGAGACCATTACACTGTAACATCGGTGTCAGAAACAGTTATTGAACTGGACGTATCATCGAGGCTACTGTCTTGGTCAAGCGCAAGCGGCAACCCTATCAGGGGGAGCGACGGTGAAAATAGTATCAGACCAACGGACACGCTAGATAAAACATTAACGGACTGGGTGTCTATAAATAGGAGTACCGTAGAGCGCATAGTGGTTAATATCGCCGCGCCAAATGGTATGTATAAAGACAATGGCAGCAAATTAACGATGTCTGCGACCGCCGAGGTGCAATATCAGGCCCTGGATGAGAGTGGAGCGCCGTTCGGGCCCATATACACCGCCACAGGAACAATAACAGGTCGTAGCTCAGATTATAATGGAGTTACGATATATGGCTATCTACCGACCGCGTCCCGTGTTCGGGTTAGAGCGCGGCGCACATCAGACACCGATAGAGGTTTTAATGGCACCGTTTCGGACGAAATTGTATACGCTAACCTGTACGGTCAGTCTGTGGACACAACCCCACACTATGGTAATAGAACAACAGTACATTCGGCGCGAAAACAAACCCCCAGGGCGACGGAAGTTAGGCAACCACAGCTACGTATGATTGCCACCGAAATGGTATTCAAATACTTGGGTGGTGGAGTTTTTGATACGGTAATGACACCAAATAGACAAGCTGTTCAGTCTCTTATTCGGCTAGCGAGGGACCCGGTAGTTGGTGGTCTTGATTTATCTGTAGCTAATATGGACGCGCTTTTAGAGACTCAAGAAGAAGTCGAGTCGTATTTCGGTTCTTCTGATGCTGGCGAGTTTTGCTACACGTTCGATGATTATAAGACCACAATGCAGGAAATAGTTACCATTATTGCCGAGGCTATATTTTGCACTCCGTATCGAAAAGGTGCGGATATACTTTTAGATTTTGAACGTCCGCGATTAGGGCCGGAGATGGTGTTTACTCACCGCAGTAAAGTAAAAACGTCTGAGAAATGGTCACGAACATTCAATGACCCCCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTGTAACAAACGTTAAGGGGACAATATCTATCCCTGAAACAGGAGGTTTAAAGACCGAGACGTACGACTCTAAAGGGGTTCGCAATAAAAAACAAGCATACTGGCTGGCGCACAGACGGCATCAAAAAAATATCTTACGCAAAGTTAACGTATCATTCACCGCAACCGAAGAAGGTATTTTTGCACGACCAAACCGCCCGATATCTGTGGTTAAAGGCTCGCGCATGGCTACTTATGATGGCTATATAACTTCAGTAGACGGTTTAACGGTTCACTTGTCGTCGCCAGTACAGTTTACCGCAGGGGAACCACATTCGCTGGTACTGAAAACTCGCGATGGTGGCGCGCAAAGCATTCCGGTAATAGAAGGGCCTGACAATCGTTCTGTAATAATGCTTTCAGTACCGCAAGAAGCCATCTATACTGGTAACAGCGCGCTGAAGACAGAATTTTCCTTCGGCAGCGATAGCCGCCATGCGGCGCAAATGATTATGGTCAGCACCGTAGAACCGAGCGACGATAGAACCGTGCGCATCACTGGGTTCAATTACGATGCCGATTACTACAAATACGATGGCGTTTCGCCATTTGGCCGCGCATTTAGCGACGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
707afdd8de6f86de38937b6880b42486bb667f4778280c31aa76e62c55a1a839
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50