Protein

View in Explore
Genbank accession
AUR91777.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFEYNGMPDTPQDSQLFKAYKASLGNGANLLSNHNFLIKTPDDSQPLPSATPTSYPPGHQIFSGVFANETTGITNLTYIDGRVSFSGGDLYFAVQNTGGIERLSDFVASVADFDGNPRTRGVSFALVGDEYRVTVGIDALEDESAVITPLGSVKFEQGIVATGHETTEPLIAQTAGRLTNYQAASVADMIAGKPLHENPITLALGQHWSTGGTSWILKDSTGPITINNFRAFNALNVLDFGAKGDNSTDDTDAIQAAIDTAESMIESASFTTAPAIFLPAGAYKSRDLKIPTAIRMVGSGRTQTTILLLTSGTSLLSQKYVDTAVFHFHLEKMSLLPDDPSVNNPSGQVIFDIRGFSRTKVEDVNIGWCGGVTGVSSNEMTYTQGANWYNSFYNVFCLRPASWPVGGVGWHIGTNDTAFQQSTTWSWFGGRTSGSGDGTGFDIAGASSMFFFGHTIEGATVQVGSNSGDRDTRSVCFHNTYFEGCDVFVNNSASWTSVVGGRQTTGTWTDTSTSSTYLTESQAKFNHINAGDFTINQYTSTYPEIISKVPSAPAALRLTNEDSGNTVSINGPTTNPASIGLRLQINNATSYEFGTFAFRTGDDGAKQLGQISRRWSEVFAVNGSINTSDATLKTDVRQLTSDEISAARALSNEIGAFKWLDRVEVKGDKAREHIGMTVQRAMEVMESFNLDPFNYGFICFDKWDDELDDLGNVEIKSGQRYSFRPDQLDRFIARGLRSEIDDIKERMDKAGI
Physico‐chemical
properties
protein length:809 AA
molecular weight: 87610,69130 Da
isoelectric point:4,75131
aromaticity:0,09889
hydropathy:-0,33745

Domains

Domains [InterPro]
DC_0205
STR
1–764
DC_0205
IPR012334
STR
275–453
IPR012334 IPR012334 IPR030392
IPR011050
STR
290–585
IPR011050 cd10144
IPR024535
ENZ
292–443
IPR024535 IPR030392
IPR036388
RBD
686–807
IPR036388
AUR91777.1
1 809
Architecture
STR
RBD
STR 1-764 | RBD 765-807 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR91777.1
1 809
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,7525
Central domain 308 571 265 0,9830
C-terminal 572 809 237 0,9275
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-571
C-terminal
572-809

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.164.O._10N.261.51.A7
[NCBI] 		1881409 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR91777.1 [NCBI]
Genbank nucleotide accession
MG592531.1 [NCBI]
CDS location
range 28876 -> 31305
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGACAATAACCCATCTACAACAAATAACGGCTCTCCGTTAAAAGCCATTGATCGCAACGAGTTACTGGCTCGTGACGAAGCGATCATGAATGACGCTGGCTTTGAGTACAACGGGATGCCAGACACCCCTCAAGATTCGCAACTGTTCAAGGCTTATAAAGCATCACTTGGCAATGGCGCGAATCTGCTATCAAACCACAACTTCCTAATTAAAACGCCGGACGACTCTCAGCCGCTGCCTAGTGCTACACCAACAAGTTACCCGCCGGGTCATCAAATCTTCTCTGGTGTCTTTGCCAATGAAACAACAGGTATCACAAACTTAACTTACATCGATGGCCGCGTGTCGTTCAGTGGTGGTGATTTGTACTTTGCCGTGCAGAATACTGGTGGTATTGAGCGATTATCTGACTTTGTTGCTTCTGTTGCTGACTTCGACGGAAATCCACGCACCAGAGGTGTTTCATTCGCTTTGGTTGGTGATGAGTATCGCGTGACGGTTGGCATTGATGCGCTTGAAGATGAAAGTGCTGTGATTACACCGCTTGGATCTGTTAAGTTTGAGCAGGGGATTGTGGCTACTGGGCATGAAACAACAGAGCCGTTGATAGCACAGACTGCTGGGAGATTAACCAACTACCAAGCCGCTAGTGTTGCGGATATGATTGCTGGTAAGCCGTTGCACGAAAACCCAATAACACTAGCACTTGGTCAGCACTGGTCTACTGGGGGTACAAGCTGGATCCTTAAAGATAGCACTGGGCCTATAACTATAAATAATTTTAGAGCGTTTAACGCTCTAAATGTTCTAGATTTTGGCGCGAAAGGTGATAACTCAACCGATGATACCGATGCAATACAGGCCGCAATTGATACTGCGGAATCTATGATTGAAAGTGCATCTTTCACTACGGCCCCTGCGATTTTTCTTCCTGCTGGCGCTTACAAGTCTAGAGACCTAAAAATACCGACAGCAATTCGCATGGTTGGATCAGGCCGAACGCAAACTACAATATTGTTATTGACTTCTGGAACATCACTTTTAAGTCAAAAGTATGTTGATACAGCTGTGTTCCATTTCCATCTAGAAAAAATGTCACTGTTACCTGACGATCCGAGTGTCAATAATCCCTCAGGTCAAGTAATTTTCGATATACGAGGATTCTCAAGAACAAAAGTTGAGGATGTTAACATTGGCTGGTGTGGTGGAGTCACAGGTGTATCTTCAAATGAGATGACTTACACGCAAGGTGCAAACTGGTACAACAGTTTTTACAACGTATTCTGTCTAAGGCCCGCATCATGGCCTGTTGGTGGTGTTGGGTGGCACATAGGGACTAACGACACAGCATTCCAGCAATCAACGACGTGGTCATGGTTTGGAGGGAGAACTTCTGGTTCTGGGGATGGTACTGGTTTTGATATAGCTGGCGCGTCTAGCATGTTCTTTTTTGGTCACACCATAGAGGGAGCAACTGTACAAGTCGGGTCAAACTCGGGAGATAGAGACACAAGATCTGTTTGTTTTCATAATACATACTTTGAAGGGTGTGATGTATTTGTAAATAATTCAGCGTCTTGGACTTCAGTTGTTGGCGGGAGGCAGACTACAGGAACATGGACTGACACGTCAACATCAAGCACTTACCTCACCGAATCTCAAGCCAAGTTTAATCACATTAATGCTGGTGATTTTACAATAAATCAATATACATCAACTTACCCTGAAATAATCTCAAAGGTTCCGTCAGCACCGGCTGCATTAAGATTAACCAATGAAGATTCAGGAAACACCGTTTCAATAAATGGACCAACAACAAACCCAGCATCTATAGGCTTAAGACTTCAGATAAACAACGCAACATCTTATGAGTTTGGTACGTTCGCATTTAGAACAGGAGATGATGGAGCAAAACAGTTAGGCCAAATATCAAGAAGATGGTCCGAGGTATTCGCTGTAAATGGCTCAATAAACACATCTGATGCAACACTAAAGACCGATGTTAGGCAATTAACATCCGATGAAATAAGTGCAGCAAGAGCTTTGTCAAATGAGATAGGGGCGTTTAAATGGCTTGATAGAGTTGAAGTTAAGGGAGATAAGGCTCGTGAGCATATCGGAATGACAGTCCAAAGGGCAATGGAGGTAATGGAATCTTTTAACCTTGACCCATTCAATTACGGGTTTATCTGTTTTGACAAATGGGATGACGAACTAGACGATCTTGGCAATGTAGAAATTAAATCGGGACAAAGATATTCATTTAGACCGGACCAACTTGACAGATTTATCGCTAGAGGATTAAGATCTGAGATTGATGATATAAAGGAAAGAATGGATAAAGCTGGAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
09459695a242c2000ee365d344c0e378441cddb875992150e5757e83ff9d5903
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank