Protein

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Genbank accession
YAF81134.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRTMKGTRDADFMPTMQTGKLTESTRKESTDMIPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11469,31500 Da
isoelectric point:9,34522
aromaticity:0,05882
hydropathy:-0,23529

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
YAF81134.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SAEN100P08
[NCBI] 		3459911 Viruses >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF81134.1 [NCBI]
Genbank nucleotide accession
PX104389.1 [NCBI]
CDS location
range 35805 -> 36113
strand -
CDS
ATGAAACTGACGACTGAACAAAAAGTAGCAATTCGTGAAATTTTGAAAACTAAACTGTCCATGGGTGTTTCAAACGTAGTTTTTGAAAAGTCTGATGGTACTATTCGTACTATGAAAGGTACTCGTGACGCAGACTTTATGCCAACCATGCAAACTGGTAAATTGACTGAATCGACTCGGAAAGAATCTACTGACATGATTCCAGTATTTGATGTTGAACTTGGTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCTGTTAATGGTATGAAAGTTGAGCATTTACTCCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
241e1215d175c46638c276adaad68056196232eba9bce89b200cf9fc6a8a3e03
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8484
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank