Protein

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Genbank accession
AUR99107.1 [GenBank]
Protein name
head-closure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQFERYNVDRPNGVNLAQEPSQLPEKVWDNADQVAFRHGTTKKVSGYERGFGETGGTVEGESIPDVLLPLRDDDGEYYWWSYATSYPDDKIYRILSTDNHVDVSPIGGIDDEPDFIWSGDSINGVPYFTKAVPYKYGVSEFEKQVPFPFFVKANRIRTFRNFMIALNFETEQFDPIDWDTDDYYKNFGFWAQGKHQSALWWSSSLVGKDLDELSWADADPTSESGWNFLGGAGGNLVDGVPLRDSFILYRERSVWQMVYTGGINVFAFKEIFNDAGALSGDCAIEVEGKHLVIGQSDIYMHDGVTKTSIADGVIRREIFESIDPNYIDSVFIAPRYKDKEAWICIPEAGSNAFGRCNKAYVYNWEEGAWSIRDIPNALCSAWGILSIPTDDITWTAESEGGDIVVIGNDGEDIYGAEFPDTIGCTWEESSDKWIDASWSYSALDWGMTFGSLLEETEGVYTGAIYTMIDNPLKDGQNFTASVEKKWMDMGDQNLIKSLNRIFPVVRGTGTIKVYTAGSMTTMQAPQWQYAGEYDPSVKTHLGCRSSGKYLHVKFEWDEISRLEVKGYSVEYKVTGAR
Physico‐chemical
properties
protein length:577 AA
molecular weight: 65042,43250 Da
isoelectric point:4,47445
aromaticity:0,13865
hydropathy:-0,41109

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99107.1
1 577
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,9832
Central domain 53 251 200 0,6523
C-terminal 252 577 325 0,3219
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-251
C-terminal
252-577

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.262.O._10N.286.51.A9
[NCBI] 		1881238 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99107.1 [NCBI]
Genbank nucleotide accession
MG592626 [NCBI]
CDS location
range 13930 -> 15663
strand +
CDS
ATGCAATTTGAACGCTACAATGTTGATAGACCTAATGGAGTCAACCTTGCTCAAGAACCATCTCAGTTACCAGAAAAGGTCTGGGATAATGCTGACCAAGTAGCGTTCCGTCATGGTACTACTAAAAAGGTATCGGGTTATGAGAGAGGGTTTGGGGAGACTGGTGGAACTGTAGAAGGTGAATCCATCCCAGACGTTCTCCTACCCCTACGTGATGATGACGGTGAATATTACTGGTGGTCTTATGCAACATCATATCCTGATGATAAGATATATAGAATACTATCTACAGATAATCATGTGGATGTATCACCGATTGGGGGTATAGATGATGAACCCGACTTTATTTGGAGTGGCGATTCTATTAATGGTGTTCCTTATTTCACAAAGGCTGTTCCTTATAAGTATGGCGTAAGTGAGTTCGAGAAGCAAGTTCCTTTCCCTTTCTTTGTTAAAGCAAATCGTATTAGAACCTTTAGGAACTTTATGATTGCACTTAACTTTGAGACAGAACAGTTTGACCCTATTGATTGGGATACTGATGATTACTATAAGAACTTTGGGTTCTGGGCACAAGGTAAACACCAGTCTGCTTTATGGTGGTCTTCATCACTTGTTGGTAAAGACTTAGATGAATTGAGTTGGGCTGATGCAGACCCTACTTCTGAATCTGGTTGGAACTTCCTTGGTGGTGCAGGTGGTAATCTGGTAGATGGTGTCCCACTACGTGATTCATTTATCCTATACCGTGAACGTTCTGTATGGCAGATGGTCTACACAGGCGGTATTAATGTATTCGCATTTAAAGAAATATTCAACGATGCAGGTGCCCTTAGTGGTGACTGTGCTATTGAGGTTGAAGGCAAGCACTTGGTTATTGGTCAGTCTGATATATACATGCATGACGGAGTTACTAAGACATCTATTGCTGATGGTGTAATTCGTAGAGAAATCTTTGAGTCTATTGACCCTAACTATATTGATAGTGTATTTATTGCACCACGATATAAAGACAAGGAAGCATGGATATGTATTCCAGAGGCAGGTAGTAATGCCTTTGGTCGTTGTAACAAAGCATATGTATATAACTGGGAAGAAGGTGCTTGGTCTATCCGAGATATTCCTAATGCACTATGTTCTGCTTGGGGTATCCTAAGTATTCCAACTGATGATATTACATGGACTGCTGAATCAGAAGGTGGTGATATTGTTGTTATTGGTAATGACGGTGAAGATATTTATGGTGCTGAGTTCCCTGATACAATAGGTTGTACTTGGGAAGAAAGTTCAGACAAGTGGATTGATGCATCATGGAGTTATTCTGCACTTGATTGGGGCATGACCTTCGGTTCTCTATTAGAGGAAACAGAGGGTGTTTATACTGGTGCTATTTACACCATGATTGATAACCCACTTAAAGATGGACAGAACTTTACAGCAAGTGTTGAGAAGAAATGGATGGATATGGGCGACCAGAATCTAATCAAGTCTCTTAATAGGATATTCCCTGTTGTTCGTGGTACTGGTACTATTAAAGTATACACAGCAGGTTCTATGACGACCATGCAAGCACCTCAATGGCAATACGCAGGTGAGTATGACCCTAGTGTTAAAACACACTTAGGATGCCGTTCAAGCGGTAAATACTTACACGTTAAGTTTGAGTGGGATGAAATAAGTCGCTTAGAGGTTAAGGGATATAGTGTAGAGTATAAAGTAACAGGAGCAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cacc0e9b27d49cbddfabc3523e5de2b5b8789285446679932c48af13e57ca684
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank