Protein

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UniProt accession
A0A6S4PDR1 [UniProt]
Protein name
Tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MGGVVSQSIPNFLNGMSQQTPTQRGINQGEDQVNLQNGLVDGLSKRPPLDYVATVDSSNIYSNKTKFWQIQRDANNQYIVALYNGGIKVFDLAGNEKTVTIASGSSYLTSTNPRENFKLVNIADYTFLANTGTTVTADSNTSAAKVEEFLVVCKLTNYGREYKVALKHPSMAQELEVVFQLPSGSDAATDSKFRDTNKITDILLYGTASTHWDGNANGIGFNVRRTDTNASVSTTQGLANYSGFTSHFTFEAFDSVIYGKPTDGNANYTITTSDGSGNTAMYSIRDEIQDFSKLPFYGKEGVILKITGEEGETLSDYYVKFTGKSGVWNETIAPATSVGLTNSTMPHALINNNDGTFTFQELDWTDRVCGDSESNPDPTFVGKKINNLTYYKNRLGILSGENLILTENASFFNYFATTSTQVLDTDPIDIAASGTQVNTLKNSVGFNESLLLFSDTAQYKLDSSGESISPTTAILNEVSSFEHDDKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGLDISVSVQNLIPTNCYQIVSNTTEDTLIFLTSDTGDSQTAPYSGTVSTTYANTMYIYKYFFDGGEKVQNAWSKWTFTGVKILGAMSLESFIYLLVSEGTTTKLVKIDLRNLKDTTIGHGVYIDLKTSVTGSYSSTTDLTTFTSPYGAKTGLIAVDRTNGNNYTATNTSGATYTIVGNHTALYIGVPYESKYRMSTQFVRENTGKGLIAVTSGRYQIRNITFNFENSGYFQVEVTPTNRDTSTAIMNGYVIGTSTSIIGQPAISTGTLRVPVQSQNTQFTLDIKSSSHLPMYIAGAEVEGYYHNRASRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90603,14530 Da
isoelectric point:4,94246
aromaticity:0,10602
hydropathy:-0,31542

Domains

Domains [InterPro]
IPR058003
TTP
4–830
IPR058003
A0A6S4PDR1
1 830
Architecture
TTP
TTP 4-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A6S4PDR1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9463
Central domain 138 358 222 0,5850
C-terminal 359 830 471 0,3756
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-358
C-terminal
359-830

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage_MedDCM-OCT-S35-C6
[NCBI] 		2741075 Uroviricota > Caudoviricetes > Autographivirales > Pelagivirus S35C6 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAQ94158.1 [NCBI]
Genbank nucleotide accession
AP013542 [NCBI]
CDS location
range 9850 -> 12342
strand +
CDS
ATGGGCGGAGTAGTATCACAATCTATTCCTAATTTCTTAAATGGAATGTCACAACAGACACCCACACAAAGAGGTATTAATCAGGGAGAAGACCAAGTTAATTTACAAAATGGTTTAGTAGATGGTTTATCAAAAAGACCACCTTTAGATTATGTAGCTACAGTAGATAGTTCTAATATTTATTCTAACAAAACAAAATTTTGGCAAATACAAAGAGATGCAAATAATCAATATATTGTAGCTTTATATAATGGTGGTATCAAAGTATTTGATTTAGCAGGTAATGAAAAGACTGTAACAATAGCAAGTGGTTCAAGTTATTTAACATCAACAAATCCTAGAGAAAATTTTAAATTAGTTAACATTGCAGATTACACATTTTTAGCTAACACAGGAACAACAGTTACAGCAGATAGTAATACGTCTGCGGCTAAAGTAGAAGAATTTTTAGTTGTTTGTAAACTTACAAACTATGGTAGAGAATATAAAGTTGCATTGAAACACCCATCAATGGCACAAGAATTAGAAGTAGTATTTCAATTACCTTCAGGTAGTGATGCGGCTACTGATAGTAAATTTAGAGATACAAATAAAATTACAGACATACTTTTGTATGGAACAGCAAGCACACACTGGGACGGCAATGCAAATGGTATAGGATTTAATGTTAGAAGAACTGACACTAATGCTTCTGTGTCTACTACACAAGGATTAGCAAATTATTCTGGCTTTACATCTCATTTTACATTTGAAGCATTTGATAGTGTAATTTATGGAAAACCTACTGATGGTAATGCAAACTACACTATAACTACATCTGATGGTTCTGGTAACACAGCCATGTATTCTATTAGAGATGAAATACAAGATTTTAGCAAATTACCTTTTTATGGAAAAGAAGGTGTTATTCTAAAAATTACTGGAGAAGAAGGAGAAACTTTATCTGATTATTATGTAAAGTTTACAGGAAAATCTGGTGTATGGAATGAAACTATTGCACCTGCAACTTCTGTAGGACTAACTAACTCTACAATGCCACACGCATTAATTAATAATAATGATGGTACATTTACTTTCCAAGAATTAGATTGGACAGATAGAGTATGTGGAGATAGTGAAAGTAATCCTGACCCAACATTTGTTGGTAAAAAGATTAATAATTTAACTTATTATAAAAATAGACTAGGTATTTTATCTGGTGAAAATTTAATATTAACAGAGAATGCTTCATTCTTTAATTACTTTGCAACAACATCTACACAAGTTTTAGATACTGACCCAATAGATATTGCGGCGTCAGGCACACAAGTTAATACACTTAAAAACTCTGTAGGATTTAATGAAAGTTTATTATTATTTTCTGATACAGCACAATATAAATTAGATAGTTCAGGTGAAAGTATATCACCTACAACAGCTATACTTAATGAAGTATCGTCATTTGAACATGATGATAAAGTTACGCCAGTATCAGCAGGTAAGTTTGCTTACTTTGCACAAGCTAGAACAAACAACACAGCAATAAGAGAATACTTTGCTGATGATGATACATTAACAAATGATGGATTAGATATAAGTGTATCAGTACAAAATTTAATACCAACTAATTGCTATCAAATTGTAAGTAATACAACAGAAGACACTTTAATATTTTTAACATCAGACACAGGAGATAGTCAAACAGCTCCTTACAGTGGCACAGTGTCTACAACATACGCTAACACAATGTACATCTATAAGTATTTCTTTGATGGTGGAGAGAAAGTACAAAATGCTTGGTCTAAATGGACATTTACAGGTGTTAAGATTTTAGGTGCTATGTCATTAGAAAGTTTTATTTATTTATTAGTTTCTGAAGGCACTACTACAAAATTAGTTAAAATAGATTTAAGAAATTTAAAAGATACAACAATAGGTCATGGAGTTTACATTGACCTTAAAACATCAGTTACAGGTTCGTACAGTAGTACAACAGACTTAACTACGTTTACATCTCCTTATGGAGCTAAAACTGGATTAATAGCTGTAGACAGAACAAATGGTAATAATTACACCGCAACAAACACGTCAGGGGCAACTTATACAATCGTTGGAAACCACACAGCGTTATACATTGGTGTGCCTTATGAAAGTAAATATAGAATGTCTACGCAGTTTGTAAGAGAAAACACTGGTAAAGGTTTAATTGCAGTAACTTCAGGTAGATACCAGATTAGAAACATAACATTTAATTTTGAAAATAGTGGTTACTTCCAAGTAGAAGTCACACCTACAAATAGAGATACATCAACAGCTATTATGAATGGTTATGTAATTGGTACGTCTACAAGTATTATAGGACAGCCTGCTATTTCAACAGGAACTTTAAGAGTACCAGTACAATCGCAAAATACACAATTTACTTTAGATATTAAATCTTCATCTCACTTGCCTATGTATATCGCAGGTGCAGAAGTTGAAGGTTATTATCATAATAGAGCAAGCAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
130d9cb76978aa124c08e2ab1a5bd3f0407c64c72fa6af660c2237316e06461c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50