Protein

View in Explore
Genbank accession
AUR86657.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIEKLMIGVRSLPRKTAEIAAKVNEIIDAGAGSEFAGAPSTILVTNNDATVTPVTADPNQFETAEITTPLAAPVTGYDADFISGSNQFAVVKHNSTETRSYRVDFSGTIVADDPAFLDTYIGIKVASSLGQEFTGGIKFYPVGVSFGGSSPAIGFSTVVFGSIAPGEDLGIELSSNTAGNLTLTDLIMFAVRISPAG
Physico‐chemical
properties
protein length:197 AA
molecular weight: 20387,67440 Da
isoelectric point:4,38083
aromaticity:0,08122
hydropathy:0,22741

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.088.O._10N.261.46.A1
[NCBI] 		1881317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR86657.1 [NCBI]
Genbank nucleotide accession
MG592463.1 [NCBI]
CDS location
range 4951 -> 5544
strand +
CDS
ATGATTGAAAAACTAATGATAGGTGTGCGCTCCCTACCACGTAAAACGGCTGAAATCGCAGCGAAAGTTAACGAGATTATAGACGCCGGAGCCGGTAGTGAATTCGCAGGAGCACCGTCGACAATTCTTGTAACGAACAATGACGCTACTGTAACTCCTGTAACGGCAGACCCTAACCAGTTTGAAACCGCAGAGATAACAACGCCACTCGCGGCTCCGGTTACGGGGTATGATGCGGACTTTATTTCTGGTAGTAATCAATTTGCAGTTGTCAAGCATAACTCTACGGAAACTCGGTCTTATCGCGTGGACTTTAGCGGTACTATCGTTGCGGACGACCCGGCGTTCCTTGATACATACATAGGCATCAAGGTGGCGAGTAGCTTAGGTCAGGAGTTCACGGGTGGTATTAAATTCTACCCTGTGGGTGTTTCATTTGGTGGAAGCTCCCCGGCTATTGGGTTTTCTACGGTAGTATTTGGCAGTATAGCTCCGGGCGAGGATTTAGGGATTGAGCTATCCTCTAACACAGCAGGTAACTTAACTCTTACGGACTTGATCATGTTTGCAGTCCGTATTTCCCCCGCGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a531c78bcad562bcfef21cbb0ffb2734bd9fa2bab3cf0a6a7c90550b569830ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank