Protein

View in Explore
Genbank accession
WPJ21648.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGSLSVGIAISPAGLATLTSTEERSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGNEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYYTNDGFETADPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53004,18210 Da
isoelectric point:5,38046
aromaticity:0,06890
hydropathy:-0,21004

Domains

Domains [InterPro]
DC_0176
STR
1–421
DC_0176
SSF69349
STR
248–333
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
251–309
IPR015173 SSF88874
WPJ21648.1
1 508
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalD_ABTNLS3
[NCBI] 		3093917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ21648.1 [NCBI]
Genbank nucleotide accession
OR756449 [NCBI]
CDS location
range 156799 -> 158325
strand -
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCCACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTTGCAACCACACAAGAAGTAATGGATGGATTGGATGCTTATAGTGCGGTGACTCCAGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTATGCTACTAACGCTGAAGCTATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCTACAGGCGTTATCAAGATTTCAACTACACCTGCCGCATTAGCTGGTACCGATGATACCACAGCAATGACCCCACTTAAAGTATCTCAGGCAATTGGTGCAGCGACGGCCGCGTTACCGGTTTATTCTACAGCAACGACTACAAATGAAGGTTTAGTTCGTTTAGCGACCAATGCAGAGGTTGGTAATGGAAGTCTTTCGGTAGGTATCGCTATTTCTCCGGCAGGATTAGCCACATTAACTTCCACCGAAGAACGAAGCGGTATTATTAAACTCGCAGGTTGGGATATGGTATCTAATGGTACCGACCATACCGCCGCAGTTACACCGGCTTCTTTGTTAGCTCGTACAGGTAATACTGGACGTATTGGGTTGGTTCGTTTATCTACTACTGTAGGCCAAGGCGATGGTAATACGGCGCTGGCTTATAATGCTAACGTTATTTCTACTTCAGGCGGCGAAATATGGGGTACTTTAAACGTTAATGGAGCATTACGTCGTAATGGTGTTGATGTTGTTACCCATGACCAATTATCAGATAGCGTTCCGGTGGGTACTATTTGCATGTGGGGTGGCAATGAAGGTAATATACCTGGTAAATGGCGTGCTTGTGTAGGTGGGACTTACACTGGTGGTGCATATTTAAATGCTGTTGGTGGGCGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTCGGTGGATATTCTGAAGGCGAAGTTAACCCGCATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAATGGTGTTGGTTCTTTCCCGCAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACATGATAACTATGGCGCTTTTGGTAACACCGCTAACTCCGGATATGTTGGTACTCGTAAAGGCCTTGACTGGGATAACCGTAGTTATTATACCAACGATGGTTTTGAGACCGCCGATCCTTGGAACCGTGATGGACATACCACATTGAATAGTGAAGGTCTTATTGCCAACGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5217c1651dc760ebbebcf63cca2a01851c9d2a0ff0b8264d186892f10fe1b7fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50