Protein

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Genbank accession
XRA41217.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQELKIGAVVDDGSGDYLRQGGQKINNNFNDLYYQLGDGDNPHAAGAWKTFKTSDQSTLKALMGHSYALDTSTGRMTLELPKGAVKDYNTAIRVRDVFNTWQTNPVTIIPAAGDTLKGDPNPKEFNTPLSDLEFVYCPPGRWEYVENKQINKISNSDMAAVIRREYLVKVQDQVDFLDVFNGNEYNIANTEVYHRGNILYYGETFSEDSDYGSPGVGDDIVALNGRDIRIRQKCNIGDTVIVISYIDGLSQWRSSYNKRQIILKDSSRTTEKSIPGTSFVGDLKNTNEFTLSMFGISQYEKINPNSLEVQFNGITQVQSGTTGQPIVYCHGAEADDPATCSLLGGIWQVSNIDYTVNFDSNNIVTGITTDRQMEHGDIISLTWFNNNIGTTMELDDIISETDSRYVSQGAPVNLTGQIVYTDFDKPQVPNIEQVPATEMNITNPYILFDLIYPIGTIYENASNPNNPATYMGMGRWVLWGEGKTVVGWNSDVSDPRFAMNNNDLDISGQPSHTAGGTTGSNSVQLKNENLPMTKTDEKVLIADNDGNIIVGGCQFDPDASGPVYTKYREDFAKTNASHQSPIEVDVVQPSITAYRWLRIA
Physico‐chemical
properties
protein length:601 AA
molecular weight: 66616,13020 Da
isoelectric point:4,59330
aromaticity:0,09318
hydropathy:-0,47221

Domains

Domains [InterPro]
IPR034695
Unmapped
1–601
IPR034695
IPR036240
STR
1–232
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–580
DC_2238
IPR008987
ATT
2–154
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–40
G3DSA:1.20.5.960
XRA41217.1
1 601
Architecture
ATT
STR
ATT
ATT 1-263 | STR 264-447 | ATT 448-600 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA41217.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 439 439 0,9788
Central domain 440 590 152 0,0073
C-terminal 591 601 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-439
Central
440-590
C-terminal
591-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage NM4.3
[NCBI] 		3413206 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA41217.1 [NCBI]
Genbank nucleotide accession
PV400811 [NCBI]
CDS location
range 88620 -> 90425
strand +
CDS
ATGAAACAAGAATTAAAAATTGGCGCCGTGGTTGACGATGGTTCAGGAGATTACCTTCGCCAGGGCGGTCAAAAAATTAATAACAACTTTAATGATCTTTATTATCAACTCGGTGATGGAGATAATCCGCACGCAGCTGGTGCTTGGAAAACGTTTAAAACTTCTGATCAATCAACATTAAAGGCTTTAATGGGTCATTCATACGCGTTAGATACTTCAACGGGCCGAATGACTTTAGAACTGCCAAAGGGAGCTGTTAAAGATTACAATACAGCAATTCGAGTTCGTGATGTCTTTAATACTTGGCAAACAAACCCAGTCACTATTATTCCTGCCGCCGGAGACACATTAAAGGGTGATCCGAATCCAAAGGAATTCAATACTCCTCTGAGCGACTTAGAATTTGTTTATTGTCCTCCTGGTCGTTGGGAATATGTTGAGAATAAACAAATCAATAAAATTAGTAACAGTGACATGGCTGCTGTTATTCGTAGAGAGTACTTGGTTAAAGTCCAAGACCAAGTAGATTTTCTCGATGTATTCAATGGCAATGAATATAACATTGCAAATACCGAAGTCTACCATCGTGGTAACATTTTATATTATGGAGAAACGTTCAGTGAAGATTCTGATTATGGTTCTCCTGGTGTTGGTGATGATATTGTTGCTCTCAATGGTCGAGATATTCGTATACGTCAAAAATGCAATATCGGTGATACAGTTATTGTAATTTCATATATCGATGGATTAAGTCAATGGCGTAGTTCTTACAATAAACGCCAGATAATTCTGAAAGATTCTTCTCGTACAACTGAGAAATCTATTCCAGGAACTTCATTCGTCGGTGATTTGAAGAATACTAATGAATTCACTTTAAGTATGTTCGGTATTTCTCAATACGAGAAAATAAACCCAAACTCATTGGAAGTTCAATTTAACGGTATCACTCAAGTTCAGTCTGGAACAACTGGTCAACCTATCGTATATTGCCATGGAGCTGAAGCAGACGATCCTGCTACTTGTAGTCTTTTAGGTGGAATTTGGCAAGTTAGCAATATAGACTACACGGTTAACTTTGATTCAAATAACATAGTAACTGGTATTACAACTGATCGTCAAATGGAACACGGGGATATAATCAGCTTAACTTGGTTCAATAATAACATTGGAACCACAATGGAGCTAGATGATATTATATCTGAAACTGATTCTCGGTATGTTTCTCAAGGTGCTCCAGTAAATCTAACAGGTCAAATAGTTTATACTGATTTTGATAAACCACAAGTTCCTAATATAGAGCAAGTACCTGCAACTGAAATGAATATAACTAACCCTTATATTCTTTTTGATTTGATTTATCCTATTGGAACTATCTATGAGAATGCATCAAACCCAAATAACCCAGCTACATACATGGGAATGGGACGATGGGTATTATGGGGAGAAGGTAAAACTGTAGTAGGCTGGAATTCAGATGTATCTGATCCTAGATTCGCAATGAATAACAATGACTTGGATATTTCAGGACAGCCTTCTCATACCGCTGGCGGAACAACTGGTTCAAATTCAGTTCAATTGAAAAATGAAAATCTGCCAATGACTAAAACTGATGAAAAAGTTTTAATTGCAGATAATGATGGGAATATTATTGTAGGTGGATGTCAATTTGACCCTGATGCATCTGGTCCAGTTTATACTAAATACAGAGAAGACTTTGCTAAAACAAATGCTAGTCATCAAAGCCCAATCGAGGTTGATGTAGTTCAGCCATCAATTACAGCATATCGCTGGTTAAGGATTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cfbcb1e820b4bed5158e57c9a9750e7f1784c94443633cec09e5290a022769d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50