Protein

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Genbank accession
BBM61812.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFGRMIMYGNIVPGPKKIIKVGASTQGQFLLTDSHDLYYIGRNQGGESGNGNTNTVSSWTLVSADVSNFFVGDRTLVIIKNDNTIWTSGQTYWFSSSTTTSYSTVLVERTNWFTNAIPVSEIANIVCTNGLIFVLSTNSVLYGAGDNGYRGSLGIGSSSIYTLTQCATNVRKVMTNANDSMYLTLDNKLYSSGWNSSGQHGTGNQTQINTWGLRSSGVIDAAIGGNALNYYNGTSYFVCGQTPNFLSSGTTTFRAVPLSTLPNSSPLFMTNSPALNTATQMVITSTYQKGVGANRGLGLNNSQTGAIYSATNLQLPVEVSEIRDVLFSDGLTSILTKNGDVYSTGSYYAIPGAIEDVAVFTKIDLPK
Physico‐chemical
properties
protein length:369 AA
molecular weight: 39480,67400 Da
isoelectric point:6,71697
aromaticity:0,10027
hydropathy:-0,06883

Domains

Domains [InterPro]
DC_0918
STR
3–78
DC_0918 DC_0436
IPR009091
STR
13–258
IPR009091
IPR009091
STR
13–350
IPR009091
IPR051553
Unmapped
17–208
IPR051553
DC_0918
STR
72–222
DC_0918
BBM61812.1
1 369
Architecture
STR
RBD
STR 3-350 | RBD 351-369
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBM61812.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 76 76 0,1965
Central domain 77 325 250 0,6952
C-terminal 326 369 43 0,6899
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-76
Central
77-325
C-terminal
326-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SP27
[NCBI] 		2495557 Uroviricota > Caudoviricetes > Asteriusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBM61812.1 [NCBI]
Genbank nucleotide accession
LC494302 [NCBI]
CDS location
range 124476 -> 125585
strand -
CDS
ATGTTACCTTTTGGAAGAATGATTATGTATGGAAATATTGTCCCTGGTCCTAAAAAAATAATTAAAGTTGGTGCTTCTACCCAAGGCCAATTCTTATTGACTGATTCACATGATTTATATTACATAGGTAGAAATCAAGGTGGTGAATCTGGAAATGGTAATACCAACACGGTGTCTTCGTGGACATTAGTAAGTGCAGATGTTTCTAATTTTTTCGTGGGTGATCGTACACTTGTTATTATTAAAAATGATAATACGATATGGACATCAGGTCAAACGTACTGGTTCTCATCTTCTACAACTACTTCTTACAGTACTGTATTAGTTGAAAGAACTAATTGGTTTACCAATGCTATACCAGTAAGTGAAATTGCTAATATTGTATGTACAAATGGTTTAATATTTGTACTTAGCACTAATTCAGTACTCTATGGTGCAGGAGATAATGGATATCGTGGTTCTTTGGGTATTGGTTCATCATCAATTTACACATTAACTCAATGTGCTACGAACGTTCGTAAAGTAATGACCAATGCGAATGATAGTATGTATCTTACATTAGATAATAAGCTATATAGTTCTGGATGGAATAGTAGTGGGCAGCATGGTACGGGGAACCAAACACAAATTAACACTTGGGGATTGCGTAGTTCTGGTGTAATCGATGCAGCCATTGGTGGTAATGCATTAAATTACTATAATGGTACATCATATTTCGTATGTGGTCAAACTCCAAACTTTCTTAGTTCAGGTACGACTACATTCCGTGCAGTTCCTTTAAGTACTTTGCCTAATAGTTCTCCGTTGTTTATGACGAATTCACCTGCCTTAAATACTGCTACACAAATGGTAATTACTAGTACATATCAGAAGGGTGTTGGGGCGAACCGTGGTTTGGGATTAAACAATTCTCAAACTGGTGCTATATATAGTGCTACCAATTTACAATTACCCGTTGAAGTTAGTGAGATTAGGGATGTTCTTTTTAGTGATGGTTTGACATCGATATTAACCAAAAATGGAGATGTGTATAGTACTGGATCGTATTACGCCATTCCAGGTGCAATCGAGGATGTTGCAGTCTTTACTAAAATTGATTTACCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
925ac7e3f3f65ce20d5f8b83bb02cbd130d3a9d59d8d3a7b66741b7ed7e20abb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8664
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of E. coli Jumbo phage Azam,A.H., Oishi,K., Miyanaga,K. and Tanji,Y. 2015-12 — GenBank