Protein

View in Explore
Genbank accession
XNZ85628.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MAGTTDPTFRFAQNVFDTDGTDKVYDISFDLGYLDSDYVVAMSGVEDPETKLLTDMTAHAVSFIDVPAGNRVKVSPVPVANRKLIIFRQTDISKLLVRFQDGKLQTGRNMDLSATQLIMAIQEILDGLRNNNLIVEQQIGTVVDLNKVITEIYKEVLELLAAGGIVSVAPRVWSGKYDPDGDEQTDFEIPGADVKDAGFYDTYMNGIGLEPDKDYTVILPTDDDPRSLIRFTKPLVEGDEWFTVLRGYAKPYTGPAPITTLAFPIQTYAGTTLFIGKPQEFALIRCTSDNPVSVTVKEIPATGDNLLVSGSWVNVVGRGMGKVVLRADPGVTLEVPAGLKPEGRAKNSVVTLTCEDADTNVWLVSGDLAIQE
Physico‐chemical
properties
protein length:372 AA
molecular weight: 40530,54350 Da
isoelectric point:4,47211
aromaticity:0,07796
hydropathy:-0,06156

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85628.1
1 372
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9633
Central domain 271 361 92 0,0073
C-terminal 362 372 10 0,9926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-361
C-terminal
362-372

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP5phi1
[NCBI] 		3162014 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85628.1 [NCBI]
Genbank nucleotide accession
PQ498456.1 [NCBI]
CDS location
range 12652 -> 13770
strand +
CDS
ATGGCCGGTACGACTGACCCGACCTTCCGGTTCGCCCAGAACGTGTTCGACACGGACGGGACCGATAAGGTTTACGACATCAGCTTCGATCTTGGCTATCTGGACAGCGACTACGTGGTCGCAATGTCCGGGGTTGAAGACCCGGAGACGAAGCTGCTAACGGACATGACCGCGCATGCTGTATCTTTCATCGATGTGCCTGCGGGCAATCGTGTTAAGGTCAGCCCTGTGCCGGTCGCTAACCGTAAGTTGATCATCTTCCGTCAGACTGACATCAGCAAGCTGCTGGTGCGGTTCCAAGACGGTAAGTTGCAGACTGGCCGCAACATGGACCTGTCCGCAACCCAGCTGATCATGGCAATTCAGGAGATTCTGGATGGCCTTCGCAATAACAACCTGATCGTGGAGCAGCAGATCGGTACCGTGGTGGACCTGAACAAGGTGATCACAGAGATTTACAAGGAAGTCCTCGAACTTCTGGCCGCTGGTGGCATCGTCTCGGTCGCACCTCGCGTGTGGTCCGGTAAGTACGATCCAGACGGGGACGAACAGACTGACTTCGAGATTCCGGGCGCTGACGTTAAGGACGCCGGGTTCTACGACACCTACATGAACGGCATCGGGCTGGAGCCAGACAAGGATTACACAGTGATCCTACCGACCGACGATGATCCCCGCTCACTGATCCGCTTCACCAAGCCGCTGGTCGAGGGCGACGAGTGGTTCACGGTGCTGCGAGGCTACGCCAAGCCGTATACCGGCCCCGCGCCGATCACTACTCTGGCGTTTCCGATCCAAACCTACGCCGGTACTACCCTGTTCATTGGTAAGCCGCAGGAGTTCGCGCTCATTCGTTGTACGAGCGACAACCCTGTGTCCGTCACGGTCAAGGAAATCCCAGCAACCGGAGACAACCTGCTGGTGTCCGGCTCGTGGGTCAACGTTGTTGGGCGAGGCATGGGTAAGGTGGTGCTGCGAGCCGATCCCGGAGTTACTCTGGAGGTTCCGGCAGGACTCAAGCCCGAAGGCCGCGCAAAGAACTCTGTGGTCACGCTGACCTGCGAGGACGCTGACACCAACGTCTGGCTCGTCTCCGGCGATCTGGCAATTCAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4c27c2bf7a6488971e7acaa74485a14984d3e5073fdf1d92985a164a74ccc91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8474
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Monsibais,A.N., Tea,O., Ghatbale,P., Whiteson,K.L. and Pride,D. — — GenBank