Protein

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Genbank accession
DBA08744.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDNALNNVESDHWSDRFSRSRRTFQGMENSFQSDQDSREQRFQDFLERSAWISLGEYGPGITFTDRNQYVMKDGVAYRPNPSTVTLPYTTTGNWSSESSLFIPLGDDVLSQNLANDSDPEKGGELVGWSRNELSDEISTVSSALNGNSINVWEFASLVTTKPVESDPATWDWTPAVQAAVNYCNASFPAKELVVPTMIRLASPISIDRPVDGVSTRDTFSIRGINGGGFYVDSEIAMFTTTISQNIDPTGMRMPSSQNVKFENLKFTCSNAALNAYILDDNKFLRIYFDSCSISYLKLLKTLSYIQSIYIGPNNNIRYWSGTFIESNGGAFDIRATGSQIEHGGNFWSTIDNTGNKSVSGCYIDNCLIEGLSGFGILYSHVRGIAVTSCYFEGNGGPDIIGDSFPSTANLGVYHAGNMHANSAANNEDPAFYAVRWGYTFGGTSLGNFCSGRLNYVRSDTQITMNDAAILGMSNTQDRLILNDIELGNVRPSDDPSAYGNRAWRAGSVVINKDHSSKGYAGWVCVIPGTPGVWYPFGNTCDGESWNFTNVDGSATMAKIGINEPSSGQTVLSLRYSNGTTVQLGRVLVGAADSAGPGYRMLRIAN
Physico‐chemical
properties
protein length:629 AA
molecular weight: 68658,02880 Da
isoelectric point:4,73943
aromaticity:0,10811
hydropathy:-0,34610

Domains

Domains [InterPro]
DC_1559
ATT
1–184
DC_1559 DC_1532
IPR011050
STR
164–464
IPR011050
IPR012334
STR
193–513
IPR012334
DBA08744.1
1 629
Architecture
ATT
STR
ATT 1-184 | STR 185-560 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
DBA08744.1
1 629
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,9873
Central domain 194 510 318 0,9852
C-terminal 511 629 118 0,9700
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-510
C-terminal
511-629

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS-D14O
[NCBI] 		2969643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA08744.1 [NCBI]
Genbank nucleotide accession
BK061588.1 [NCBI]
CDS location
range 3360 -> 5249
strand -
CDS
ATGACTACGTATGCCACCGGCAATCCGCTTGGCTCCAAAGACCCGCGTGATCTGTACGACAACGCAGAGAACTTTGATAACGCCCTGAATAATGTTGAGTCAGACCATTGGTCTGACCGGTTTTCCAGGTCTCGTCGCACATTCCAGGGCATGGAAAATTCGTTTCAATCCGATCAGGATAGTCGAGAGCAGCGCTTCCAAGACTTCTTGGAACGTTCTGCTTGGATTTCTTTAGGTGAATATGGACCTGGCATCACATTCACTGATCGTAATCAGTATGTGATGAAAGATGGAGTTGCCTACAGGCCAAATCCAAGCACGGTTACTCTTCCGTACACTACTACCGGAAATTGGTCTTCAGAGTCGTCTTTATTCATTCCTCTCGGTGACGACGTTCTTTCGCAGAATCTTGCAAACGACTCAGACCCCGAGAAGGGCGGGGAGCTAGTAGGATGGAGCCGTAATGAGCTATCCGATGAAATCTCAACAGTTAGTTCTGCACTAAATGGTAATAGCATAAATGTATGGGAATTTGCCTCTCTAGTCACTACGAAGCCGGTGGAATCAGACCCTGCTACGTGGGATTGGACTCCTGCTGTTCAGGCTGCGGTTAATTACTGTAACGCTTCATTCCCGGCCAAAGAGCTTGTTGTTCCAACGATGATTCGCCTAGCTAGCCCTATATCTATTGACCGGCCTGTCGATGGTGTATCTACTAGGGATACATTTTCTATAAGAGGCATAAATGGTGGTGGTTTTTATGTTGACTCAGAAATAGCAATGTTCACCACAACAATTTCTCAAAATATTGACCCGACTGGCATGAGAATGCCGTCTTCTCAGAACGTAAAGTTTGAGAATCTAAAGTTTACATGTTCTAATGCTGCACTCAATGCATATATACTAGATGATAATAAATTCCTCAGAATTTATTTTGATTCGTGCTCTATTAGCTATTTGAAGTTGCTTAAAACTCTAAGTTATATTCAATCAATATATATAGGCCCAAACAACAATATTAGATATTGGTCTGGTACTTTTATTGAATCAAATGGCGGCGCTTTTGATATCCGGGCAACTGGCTCTCAGATTGAGCATGGTGGAAATTTCTGGAGCACTATTGATAACACCGGTAACAAATCGGTTAGTGGTTGTTATATAGACAATTGCTTAATTGAAGGTCTTTCCGGTTTTGGAATTCTTTACTCTCATGTTAGAGGAATAGCCGTTACATCTTGCTATTTCGAGGGTAATGGCGGCCCTGATATTATTGGCGATAGCTTCCCCTCCACGGCAAACCTTGGCGTGTACCATGCTGGTAATATGCACGCTAATAGCGCAGCTAATAATGAGGACCCTGCATTCTATGCGGTTAGGTGGGGATACACGTTCGGCGGAACGAGTCTTGGTAATTTCTGCTCTGGTAGGCTGAACTATGTTCGCTCTGATACTCAGATCACTATGAACGATGCCGCCATTCTTGGGATGTCTAATACCCAAGATAGGCTAATCCTGAATGATATTGAGTTGGGTAATGTAAGGCCTAGTGATGACCCATCTGCATATGGGAATAGGGCATGGCGAGCTGGATCTGTTGTTATTAACAAGGACCATTCTTCTAAAGGATATGCTGGATGGGTTTGTGTTATCCCTGGAACACCTGGAGTTTGGTATCCATTTGGAAATACCTGCGATGGTGAAAGCTGGAACTTTACAAATGTCGATGGATCGGCAACTATGGCAAAAATAGGAATAAATGAGCCATCATCAGGGCAAACTGTGCTGTCTCTTCGATATAGCAACGGCACTACAGTACAATTAGGTAGAGTCCTAGTGGGAGCAGCCGACTCTGCTGGCCCTGGATACAGAATGCTCAGGATCGCAAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e00389825ebd934126ecb43bb434a84501df534edc8723964c02ca6ce8b8fe6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7556
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage identification and molecular analysis in the genomes of 53 Pseudomonas aeruginosa strains isolated from critical care patients Gonzalez de Aledo,M., Blasco,L., Lopez,M., Ortiz-Cartagena,C., Bleriot,I., Pacios,O., Hernandez-Garcia,M., Canton,R. and Tomas,M. 2023 — GenBank