Protein

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Genbank accession
XPK42437.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPRLIFKNNFEVALAQPTTTSDTTITIRSGSGFPTLGANERVVATIVDAATGLQFEIVTVTAVVGDVLTVQRAQEGTAARAWAAGDMLSIRTTAASLTNTVRNFGEIPSGINLNALTGSWFGQYSQPISSAASTALNYPVDSAGVLEVQQTKANSIEGCVQIYRAYNLPFHYTRTYDSVSGWTEWRKFFTSGDIIPVANGGTGQTTIQGMKSAFGFGAVADQNIVPTSMGGTGSADNAQAWLNIRPQGSTPLAGDPVNDYDAATKRWVENLVNTGTVGPSMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMLSPIADADWLANPAKRGKYSLGNGTTTFRVPDRNGVQTGSIQALFGRGDGGNSSSNGVVSESGAPNITYTAPHTMVTLASLPSQVATNGAFQSITSGDSPAAAGSGSRFIQTNFDASRCSPVYGRSAAEIVPRNFVGVWVIRASGGFVAANTSWSVINADSSAPVAGTLVVGGKVESKYSNPSSSQFARLYSSSSWGSSSFAVVEAEGSSKHAYKFYEDGTVDFRQSGKTNPFRMYTPLGTWNGITDAAVSNLTTNGMDRVAIASGSDTLVRGYSIGATKPNGYPTKVGYHMYLPGNDAFGIACVVIGGDNGKFCRYFFDIDGQIYGSTDYGNFSYTKNGTSDSRVKHGIAPVGVDKSYSNIKGLEFVEFIYDNDEQNRVRHGIIAQQAEVVEPLYVKTRKYIGSNPGEIVEQKELDTTPMLLDTMHVVQELMKKVESLEAEIAALKAAK
Physico‐chemical
properties
protein length:777 AA
molecular weight: 82862,27180 Da
isoelectric point:5,65886
aromaticity:0,09653
hydropathy:-0,20618

Domains

Domains [InterPro]
DC_0085
STR
1–777
DC_0085
cd19958
STR
105–188
cd19958 SSF88874 IPR030392
IPR030392
CHP
669–721
IPR030392 Coil
XPK42437.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK42437.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 529 529 0,4365
Central domain 530 728 200 0,1347
C-terminal 729 777 48 0,9743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-529
Central
530-728
C-terminal
729-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ManiWeber_Bas99
[NCBI] 		3398425 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42437.1 [NCBI]
Genbank nucleotide accession
PQ850618.1 [NCBI]
CDS location
range 64575 -> 66908
strand -
CDS
ATGCCAAGGCTAATATTCAAAAACAACTTTGAGGTCGCGCTGGCTCAACCAACGACGACTTCAGACACCACAATCACAATTCGCTCAGGGTCAGGCTTTCCGACCTTGGGCGCAAACGAGCGTGTAGTGGCGACAATCGTCGACGCTGCAACAGGCCTCCAATTCGAAATCGTCACAGTAACAGCTGTCGTTGGTGATGTCCTGACCGTTCAGCGTGCACAGGAAGGGACTGCAGCGCGTGCATGGGCGGCTGGTGACATGCTTTCCATTCGAACTACTGCCGCATCCTTGACCAATACTGTGCGAAATTTTGGAGAGATTCCTTCAGGCATCAACCTTAATGCCTTGACTGGTTCATGGTTTGGACAGTATTCCCAACCGATAAGCTCAGCGGCAAGCACGGCCCTGAATTATCCTGTTGATAGTGCAGGCGTGTTGGAAGTCCAGCAAACAAAGGCTAACTCGATAGAAGGTTGCGTGCAAATATACAGAGCGTACAACCTCCCATTTCACTATACCAGGACATATGATTCTGTAAGTGGATGGACAGAATGGCGCAAGTTTTTCACGAGTGGCGATATAATTCCAGTCGCCAACGGCGGCACAGGGCAAACTACCATTCAGGGTATGAAGTCCGCTTTTGGATTTGGCGCAGTCGCTGATCAAAACATTGTCCCGACTTCCATGGGCGGTACTGGCTCAGCAGACAATGCTCAAGCTTGGCTAAATATTCGTCCACAAGGGTCAACTCCGCTGGCTGGCGACCCTGTGAATGATTACGATGCTGCAACTAAGCGTTGGGTCGAAAACTTAGTTAACACAGGCACCGTTGGCCCAAGCATGAACGGTGTTATGAACTATGGCGTTGGTGATTTTCACCTGCGCGACAGTCGCGCATACATTCAGCCGTATGAAGTTGTCTCCGACGGACAGTTACTCAACCGTGCGGACTGGCCTGAACTGTGGGCTTATGCGCAAATGCTTTCCCCTATTGCCGATGCTGACTGGCTTGCCAACCCAGCAAAACGCGGCAAGTATTCTCTGGGTAACGGAACAACGACATTCCGTGTGCCAGACCGCAACGGGGTGCAGACTGGTTCCATACAGGCCTTATTCGGCAGGGGTGACGGTGGGAATTCATCATCCAACGGGGTTGTGTCTGAATCAGGCGCTCCAAATATAACTTACACAGCGCCGCACACAATGGTGACATTGGCTTCTTTGCCAAGCCAAGTGGCAACTAATGGTGCTTTTCAGTCAATAACTTCGGGTGACTCTCCTGCGGCAGCAGGCTCTGGGTCAAGATTCATACAAACAAACTTTGACGCCTCTCGCTGCAGTCCTGTTTATGGCCGTTCAGCAGCGGAAATTGTTCCGCGTAACTTCGTTGGCGTTTGGGTGATTCGTGCATCGGGTGGATTTGTTGCTGCGAATACGTCTTGGAGCGTAATAAATGCAGACTCAAGCGCACCAGTGGCAGGCACATTGGTTGTCGGCGGCAAAGTAGAGTCAAAATATAGCAATCCTAGTTCATCACAGTTTGCACGTCTGTACTCAAGTTCTTCATGGGGTTCTTCTAGTTTTGCCGTCGTAGAGGCGGAGGGTTCTTCCAAGCACGCTTATAAATTCTATGAAGATGGCACCGTTGACTTTCGACAGTCAGGGAAGACCAACCCATTCCGCATGTATACGCCTTTAGGCACATGGAATGGAATAACGGATGCCGCTGTATCTAACTTGACCACTAACGGAATGGACAGGGTGGCAATCGCGAGTGGATCAGATACGCTGGTGCGCGGCTATTCTATCGGTGCCACCAAACCTAATGGATACCCAACCAAGGTTGGATACCATATGTATTTACCAGGTAATGATGCATTCGGCATAGCTTGCGTGGTAATCGGTGGAGATAACGGAAAATTTTGCCGTTACTTTTTTGACATTGATGGTCAAATATATGGTTCAACCGATTACGGTAACTTCAGTTATACAAAAAATGGCACTTCTGACTCACGTGTAAAACACGGCATCGCCCCTGTTGGAGTTGATAAATCATACTCTAATATTAAAGGACTGGAATTTGTAGAGTTCATTTATGACAATGACGAACAAAATCGAGTTCGGCATGGCATTATTGCACAGCAAGCAGAGGTCGTTGAGCCTTTATATGTTAAGACGCGTAAGTATATTGGCAGCAATCCAGGAGAAATTGTTGAACAAAAAGAACTTGACACAACACCTATGCTTTTGGATACGATGCACGTGGTGCAGGAGTTGATGAAGAAGGTCGAGTCACTAGAGGCAGAGATAGCCGCGCTAAAAGCAGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b16b12e68220f293aa65401cb5c307e1c7ad3a76c5089abd207bfb86cf921f48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank