Protein

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Genbank accession
WBY53558.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQAALPIDLSDIFHLKQGIEDKRCTLEQLLAPHSSLRNNPHGVTKTQIGLDNVINALQLVAANNLSDIVNVAEARANLQIMSSEEVNSLVQQHINDKSNPHNTTKAQVGLSNVQNWTTSNLYNEDADKYATARAVNNLYKAVQASYPVGTIHLSMNSANPSTYLICGGTWELVSKGRALVGYASDARPAGSVFGASTVTLSVNNMPQHSHSVSLSGGGHTHNATVSISAFDYGTKTTNSFDYGTKATNTTGNHTHNVSGNTSTNGTHNHDVYPRENDGTGNAVADSDGGGARRTSRTSSDGAHSHSFSVTSGASGDHSHTVGIGAHSHTVGIGSHTHSGTVTVSSSEHTHSGNTNSVGGGQAVNIEQPSFVLYVWQRTA
Physico‐chemical
properties
protein length:390 AA
molecular weight: 40921,04290 Da
isoelectric point:6,36679
aromaticity:0,04872
hydropathy:-0,42282

Domains

Domains [InterPro]
DC_1039
STR
1–390
DC_1039
IPR051934
Unmapped
102–358
IPR051934
IPR053827
ATT
154–268
IPR053827
WBY53558.1
1 390
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-268 | STR 269-390
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage REP7
[NCBI] 		3022460 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBY53558.1 [NCBI]
Genbank nucleotide accession
OQ174506.1 [NCBI]
CDS location
range 1471 -> 2643
strand -
CDS
ATGGCGGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCAGCCTTACCAATTGACCTTAGTGATATCTTCCATCTTAAGCAGGGTATTGAGGATAAGAGATGCACTCTTGAGCAATTACTTGCTCCACACTCAAGCCTGAGAAATAACCCTCATGGTGTTACTAAAACACAAATTGGTTTAGATAATGTTATTAACGCTCTTCAGTTAGTTGCTGCAAATAACTTATCAGATATTGTTAATGTAGCTGAGGCAAGAGCAAATCTACAGATTATGTCTTCCGAAGAGGTTAATAGCCTTGTTCAACAGCATATTAATGATAAGAGTAATCCGCACAATACAACTAAGGCACAGGTTGGTTTGAGTAATGTTCAGAACTGGACAACATCTAACCTGTATAACGAAGATGCAGATAAGTATGCTACAGCAAGAGCAGTAAATAACTTGTACAAGGCTGTTCAGGCTTCTTATCCAGTAGGTACTATCCATCTTTCTATGAACTCTGCAAATCCTTCTACATATTTAATTTGTGGAGGTACTTGGGAGTTGGTTTCAAAAGGTAGGGCATTGGTTGGTTATGCCTCTGATGCAAGACCAGCAGGTTCTGTATTTGGTGCTTCAACTGTCACTCTGTCAGTTAATAATATGCCTCAACACTCCCACTCTGTATCACTTAGTGGTGGTGGCCACACTCATAATGCAACTGTGTCAATCTCAGCTTTTGACTATGGAACTAAGACTACCAACTCTTTTGACTATGGAACAAAAGCTACTAACACAACTGGCAACCATACACACAATGTATCAGGTAACACAAGCACAAATGGTACTCACAACCATGATGTGTATCCTAGAGAGAATGATGGTACTGGTAATGCTGTAGCTGACTCTGATGGTGGCGGTGCAAGAAGGACATCAAGAACATCTAGTGACGGTGCACACTCACATAGCTTTAGTGTTACATCTGGTGCATCCGGTGACCACAGCCACACAGTCGGTATTGGTGCTCACAGCCACACAGTCGGTATTGGTTCACATACACACAGTGGTACTGTGACAGTCTCTTCTTCTGAGCATACACATAGTGGTAATACGAATAGTGTTGGTGGAGGTCAGGCAGTTAATATTGAACAGCCATCCTTCGTCCTGTATGTATGGCAGAGAACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9d1f6e05aa5e96d3c76e3af224dd067aff5bc76bcbeddba7a27dd8672a34a5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7431
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Swapped genetic code blocks viral infections and gene transfer Nyerges,A., Vinke,S., Flynn,R., Owen,S.V., Rand,E.A., Budnik,B., Keen,E., Narasimhan,K., Marchand,J.A., Baas-Thomas,M., Liu,M., Chen,K., Chiappino-Pepe,A., Hu,F., Baym,M. and Church,G.M. 2022 — GenBank