Protein

View in Explore
Genbank accession
URG18042.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFSQPGGSVSKDVNKQSIARVFGVKMSEVAYLKVGLVVDGYKILYDKATQTCWERTPSLGNVISWSLSGNTLEVVTSSGVYTLHSAQIYEIINNGSSNIVLPQGGVIRDAIPYVTPEMFRSLVINGDWEPAIEMADSVAANLGVPLKGFGKIYNIGAFVDFTCDNIDGIGLRPLAGYTGAAASFTINQVTGKLRLNVDIQNFQSYGCKVYRGSYTGIPSLILDGCVFNNNGSLLRTTCVNPVNTATDFVIDVTNSAGFAAGNMVWVGDSKCTILSISGNTITLVNDGTKPILLSGGTGTGSYAAGQFLLRMGTVRTVSLLVMVVLNLVGISVLLTV
Physico‐chemical
properties
protein length:339 AA
molecular weight: 35923,81210 Da
isoelectric point:6,57112
aromaticity:0,08260
hydropathy:0,30029

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 DC_1808
URG18042.1
1 339
Architecture
ATT
STR
ATT 1-93 | STR 99-326 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG18042.1
1 339
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,9903
Central domain 131 328 199 0,7322
C-terminal 329 339 10 0,9190
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-328
C-terminal
329-339

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage T765
[NCBI] 		2945908 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG18042.1 [NCBI]
Genbank nucleotide accession
ON399185 [NCBI]
CDS location
range 151847 -> 152866
strand -
CDS
ATGAATCCACAATTCAGTCAGCCTGGCGGTTCCGTCTCTAAAGACGTGAACAAACAATCTATCGCAAGAGTGTTCGGCGTTAAAATGAGCGAAGTCGCTTATTTGAAGGTCGGACTCGTTGTTGATGGATACAAAATTCTTTATGACAAGGCGACCCAAACATGTTGGGAAAGAACCCCATCTCTGGGAAATGTAATAAGTTGGTCCCTCTCTGGAAATACTTTGGAAGTCGTTACTTCTTCCGGTGTGTACACTCTGCACTCTGCACAAATATACGAAATCATAAATAACGGATCTTCAAATATAGTTCTTCCTCAAGGTGGGGTGATACGGGACGCTATCCCATATGTCACCCCAGAAATGTTTCGTTCCTTGGTTATTAACGGGGATTGGGAACCTGCCATAGAAATGGCAGACTCTGTGGCGGCAAATTTGGGAGTCCCCTTAAAAGGATTTGGAAAGATTTATAATATTGGGGCATTTGTAGATTTTACTTGTGACAATATTGATGGTATAGGTTTGCGTCCATTAGCTGGATACACAGGTGCAGCAGCATCTTTTACCATAAACCAAGTTACAGGTAAGTTACGACTTAATGTGGATATTCAAAACTTCCAATCATATGGTTGTAAAGTATACAGGGGTAGCTATACCGGAATACCTAGCCTTATACTGGATGGGTGTGTATTCAACAACAATGGTTCTTTGTTGCGTACTACATGTGTTAACCCAGTTAATACAGCTACAGATTTCGTCATAGACGTAACCAACTCTGCTGGTTTTGCAGCTGGTAATATGGTTTGGGTTGGTGATAGTAAATGTACAATTCTTTCCATATCTGGGAATACAATCACACTGGTTAATGATGGTACAAAACCTATCCTACTAAGTGGAGGCACTGGTACTGGTTCTTATGCTGCCGGTCAGTTTTTACTAAGGATGGGGACGGTAAGAACGGTATCACTATTGGTAATGGTGGTACTGAACCTAGTTGGGATATCCGTACTGTTAACGGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7f3f80409bb5358c9d2920f3886be5177cd5c63e29e83171786118203d57bb87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phenotypic and genotypic characterization of lytic phages against Klebsiella pneumoniae resistant to carbapenems Nolivos,K.V., Cabezas-Mera,F.S., Tisalema,E.E., Reyes,J.A., Fierro,I.M. and Pazmino,L.A. 2023-06-01 — GenBank