Protein

View in Explore
Genbank accession
ULF50196.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MPLTQVSSRLIEDTLRYVLGASGTNHYTFTGKGLNGAVNDPTLTLSRGHTYIFENRNSNGAHPFYIKTSIANGGTNDAYNTGVTNNGGAGGTEIVFTVPHDAPDVLYYQCSSHSSMAGQLKIAGAVADGSITESKLANGAVTTNKISDNQITSAKIVDTAVTLAKLEHGTSSNDGKFLRANNGADPSFETINTTPADGSITTAKLADNSVDKDKLAHGLHLFCTGSDKGIILQGNIGEIGDVSGFQAVNDAANANTDFGIRANSIRLATTSAERVRVTDNGLTFNGDTAADNALDDYEIGTFTPNIQDAASGGNSHGNSGVRQGKYVKIGSAVTVMIVCRSLSNSGLNGSHQLFITNLPFRQSGVERAIAFAQVQYFNNVSNTEFGMHFQINNNETIMRFFKMKDNQGANPAVTFNHWMYSSGYYGFSTTFTYITDQ
Physico‐chemical
properties
protein length:437 AA
molecular weight: 46477,64250 Da
isoelectric point:5,81522
aromaticity:0,08467
hydropathy:-0,30549

Domains

Domains [InterPro]
DC_0856
STR
4–435
DC_0856
IPR008972
STR
14–123
IPR008972
IPR008972
STR
29–122
IPR008972
ULF50196.1
1 437
Architecture
STR
STR 4-435 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ULF50196.1
1 437
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9008
Central domain 18 216 200 0,0662
C-terminal 217 437 220 0,9642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-437

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SCSP2
[NCBI] 		2914506 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ULF50196.1 [NCBI]
Genbank nucleotide accession
OM416780.1 [NCBI]
CDS location
range 28859 -> 30172
strand +
CDS
ATGCCATTAACACAAGTTTCATCAAGACTTATCGAGGACACTCTTAGATATGTTTTAGGTGCTAGTGGTACAAATCACTATACGTTTACAGGTAAAGGTCTTAATGGTGCAGTAAATGACCCTACGTTAACTCTTAGCAGAGGCCATACTTATATTTTTGAAAATAGAAATAGTAATGGCGCACACCCTTTTTATATAAAAACCAGTATTGCTAATGGTGGTACTAATGATGCCTATAACACAGGAGTAACAAATAATGGTGGTGCAGGTGGTACAGAGATAGTATTTACAGTACCGCATGATGCACCTGACGTTTTGTACTACCAATGCAGTAGTCACAGCAGTATGGCTGGTCAGTTAAAGATTGCTGGTGCTGTAGCAGATGGAAGTATAACTGAATCTAAATTAGCTAATGGTGCAGTTACTACAAATAAAATATCAGATAATCAAATTACTTCAGCTAAGATTGTAGACACAGCCGTAACTCTAGCCAAATTAGAACACGGCACATCATCTAATGATGGTAAGTTTTTACGAGCAAACAACGGAGCAGACCCTAGCTTCGAAACAATAAATACAACACCAGCAGACGGAAGTATTACTACAGCAAAACTTGCAGACAATTCAGTTGATAAAGATAAATTAGCTCATGGACTTCATTTGTTCTGTACTGGTTCTGATAAAGGAATAATATTACAAGGAAATATTGGCGAAATTGGTGATGTATCTGGTTTTCAAGCTGTTAATGATGCTGCTAATGCTAATACAGATTTTGGTATAAGAGCTAATAGTATTAGGCTTGCAACAACTTCAGCAGAGAGAGTAAGAGTTACCGATAACGGATTAACATTTAACGGAGACACCGCAGCAGATAACGCACTTGATGACTATGAAATAGGCACTTTTACACCAAACATACAAGACGCTGCAAGTGGTGGTAATAGTCATGGTAATAGTGGTGTTAGACAAGGTAAATATGTAAAAATTGGAAGTGCTGTAACTGTTATGATTGTCTGTCGTAGTTTAAGTAATAGTGGTCTAAATGGTTCACATCAACTATTTATTACTAACTTACCTTTCAGACAATCTGGCGTTGAACGAGCTATCGCTTTTGCACAAGTACAGTATTTTAATAATGTAAGTAATACAGAATTTGGTATGCACTTTCAAATTAATAACAATGAAACAATAATGAGATTCTTCAAAATGAAAGACAACCAAGGAGCTAACCCTGCTGTTACATTCAACCATTGGATGTATAGTTCTGGTTACTATGGGTTCTCTACTACCTTTACATATATTACAGATCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c575bd22a6fa5002fa1527a0387f97b1314dcede71f2c5b21e2af7e22ea6cae9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cosmopolitan and abundant lineage of cyanopodoviruses lacking the DNA polymerase gene Cai,L., Chen,Y. and Zeng,Q. 2022-11-10 — GenBank