Protein

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Genbank accession
YP_009834668.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MINNTEQHISSKAVDVVLDPSTTNFPATTNDVQKMAELIQPHAIGRYEDMKATETKMGILRIATEAEVLAGTVADAIVTPKTLQAKWVRPDASETVKGLVRYATSAERLETAASASIGINTAGIWDIIRTKAIGSTTKAGTLKLSTITIGQQGTDSTTATSPDVVKAMIDKFAVTANSGATELTSGIVKISPSPVINAALHNGVAVSPKGFIETRATQSRVGTVKMATQAESNARTATDVAISPATLPIASSSQWGIVALTDVAVQGATNKALSSHGATTLVAKTGGTMTGALITPNIYLTNPQDGSPNAVVRYDWAVSAFDDKQNQINGKVNRGSAVTLNRTDKQLIFNAAPYGGHKSGDFNMSQPWWNYDGLIVVSSGDDGRHMKSNYISKAQISILQDNFANAWWIADTDSTWWIGRFNANGTYFHTTGDNCIIWHVWGVNDIYQTT
Physico‐chemical
properties
protein length:450 AA
molecular weight: 47949,28970 Da
isoelectric point:6,71561
aromaticity:0,06667
hydropathy:-0,16267

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-zj
[NCBI] 		2024208 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009834668.1 [NCBI]
Genbank nucleotide accession
NC_048673 [NCBI]
CDS location
range 198924 -> 200276
strand +
CDS
ATGATTAATAATACAGAACAACATATTAGTTCTAAAGCTGTTGATGTGGTGCTAGATCCTAGCACCACTAATTTCCCAGCAACAACTAATGATGTACAAAAAATGGCTGAACTCATACAACCCCATGCAATTGGAAGGTATGAGGATATGAAAGCGACCGAAACAAAAATGGGTATTCTCAGGATTGCGACGGAAGCGGAAGTATTGGCAGGAACCGTGGCTGATGCAATCGTTACTCCCAAGACCCTACAAGCCAAATGGGTGCGCCCAGATGCATCAGAAACGGTTAAGGGTCTAGTTAGGTACGCTACCAGCGCGGAACGTCTAGAAACAGCAGCAAGCGCATCTATAGGCATTAATACGGCTGGTATATGGGATATCATCAGAACAAAAGCAATTGGTTCTACCACAAAAGCCGGTACGTTGAAATTATCGACGATTACCATTGGACAACAAGGGACTGATTCAACTACTGCAACAAGTCCTGATGTTGTTAAGGCAATGATAGATAAGTTCGCAGTTACTGCAAATTCCGGTGCAACTGAATTGACCTCTGGGATAGTTAAGATTTCCCCATCCCCAGTAATTAATGCGGCTTTACATAACGGTGTAGCAGTTAGCCCGAAAGGTTTTATTGAGACTCGCGCAACTCAATCAAGAGTTGGTACAGTAAAAATGGCAACTCAAGCCGAGTCTAATGCCCGTACTGCAACTGACGTAGCCATTAGCCCTGCAACTCTTCCGATTGCATCGTCTTCCCAGTGGGGTATTGTTGCATTGACAGACGTCGCTGTACAAGGGGCAACGAATAAAGCGTTGAGTTCCCATGGAGCAACAACCCTTGTTGCAAAAACTGGGGGAACAATGACCGGTGCGCTGATCACTCCAAATATATATCTTACAAATCCCCAAGATGGTTCACCAAATGCGGTTGTGAGATATGATTGGGCTGTTAGTGCATTTGATGATAAACAAAATCAAATAAATGGCAAGGTTAACCGTGGAAGCGCAGTAACTCTTAATAGAACCGACAAACAATTGATTTTTAATGCTGCTCCATACGGAGGGCATAAAAGTGGTGACTTTAATATGTCACAGCCGTGGTGGAATTATGATGGGTTAATAGTTGTATCCTCTGGGGATGATGGTAGACACATGAAGTCGAATTATATATCGAAGGCACAGATCTCTATCCTTCAAGATAATTTCGCTAACGCTTGGTGGATTGCAGACACTGATTCTACTTGGTGGATTGGTAGGTTTAACGCCAATGGTACTTATTTCCATACCACAGGTGACAACTGTATTATATGGCATGTTTGGGGTGTTAATGACATATACCAAACAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a17dc9be04a0d24f4c5cf03a48e39025f4705f3a0c2e59234ae4b24cc8e1764
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro design and evaluation of phage cocktails against multidrug-resistant Aeromonas salmonicida Chen,L., Yuan,S. and Ma,Y. 2018-07-06 — GenBank