Protein

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Genbank accession
QJD54871.1 [GenBank]
Protein name
putative tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MAYNESAYQNLLFGVSQQAPQDRLPGQLDAQLNMTSDLVAGLRRRAAVGVTSDIGAYSDLSKVKQYNTDMGGVAVSMVVDTGTGTVRVVEENSGNVLASLTDPYLTAASARVIRMVTLDDTVWVCNVDRAPVVSASAERGNYPNPDNMGYFYVVAGSPSKTYSVTFTNRATGASTDISWTTPNGTSVGDAAASTPEAIAEQLVSLGNSSWAMYGAVLTRVGAYVTVRTTTVSVTLSSVSGSTYVRASNAGSIRDPAELPARLVGANGYIIATGTSNTKTYYRYEDSSKVWLEDVKWEDMVSLSNMPIQIQRSDAGVYTIVTPVYERRSAGDAKTNPVFKFTTAGITGMAAFQGRLVLLSNEYVCMSASDNPLRWFRSTLAALADNDPIEVAAQGSLTAPYEYALNFNKDLVLFSKRYQGIMPGSGIVTPRTANLALMTRYDVDVNAEPVACGRSMFFGAPRSLGYVGMHELTPSQYSDSQYVADDVTSHIPRYVQGPFRFIAASTTGNLMVAGAANPNELLVHEYLWSGAEKVHASWHKWTFAWPVVDVYFSGDVIVALFGVAGKLVICRVDLQRGAGDVSPTVARLDFYTDVTCVVPGELTVPAVMSSLGADIRAFKIGGANAYLGQKVFSSALGTSGLVLSVPEAVVGDRYTVGFPFVSSCTLTPAVIKDAKGVPITTSRAVLHRYRVSVANTGQFAYNVRDDIRQTGDTTTTPLRLYSQQLGAGLPLADSATVTIPARVDMSTGMLTLESDDYYDLNVRSVEYGFRYHQRFRRA
Physico‐chemical
properties
protein length:777 AA
molecular weight: 83618,32320 Da
isoelectric point:5,79265
aromaticity:0,09395
hydropathy:-0,01197

Domains

Domains [InterPro]
IPR058003
TTP
1–776
IPR058003
DC_0058
STR
1–777
DC_0058
QJD54871.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJD54871.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9900
Central domain 139 342 205 0,2088
C-terminal 343 777 434 0,2303
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-342
C-terminal
343-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage MR6
[NCBI] 		2711173 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJD54871.1 [NCBI]
Genbank nucleotide accession
MT104469 [NCBI]
CDS location
range 24498 -> 26831
strand +
CDS
ATGGCCTACAATGAAAGTGCGTACCAGAACCTGCTGTTTGGTGTAAGTCAACAAGCGCCCCAGGATCGTCTGCCGGGGCAGTTGGATGCCCAACTTAACATGACATCTGATCTTGTGGCAGGGCTCCGTAGACGCGCCGCAGTTGGGGTAACATCCGACATTGGGGCGTACAGCGACCTATCCAAGGTGAAGCAGTACAACACGGATATGGGCGGCGTTGCCGTGTCAATGGTAGTCGACACCGGTACTGGCACCGTGCGTGTGGTAGAGGAGAACTCCGGCAACGTCCTCGCCAGCCTGACCGACCCGTACTTGACAGCGGCCAGTGCCCGCGTAATCCGTATGGTGACGCTGGACGACACTGTTTGGGTCTGTAACGTGGACCGGGCACCCGTAGTCTCAGCCAGTGCAGAGCGCGGGAACTACCCGAACCCCGACAACATGGGGTACTTCTACGTAGTTGCCGGGTCCCCGTCCAAAACGTACTCGGTGACATTCACTAACCGTGCCACGGGGGCCAGTACGGATATATCGTGGACAACCCCTAATGGCACCTCTGTGGGTGACGCTGCGGCCAGTACACCCGAGGCCATTGCCGAACAACTAGTGTCCCTCGGTAACAGCTCATGGGCGATGTACGGTGCCGTGCTTACTCGCGTAGGGGCCTATGTGACCGTGCGCACTACAACTGTAAGTGTGACACTAAGTTCTGTGAGCGGCAGCACTTACGTACGCGCGTCGAACGCAGGCAGCATACGCGACCCAGCAGAACTGCCTGCGCGGCTCGTGGGTGCCAACGGTTATATTATCGCCACCGGCACCAGTAACACGAAGACGTACTACCGCTATGAGGACAGTAGTAAGGTCTGGTTGGAGGACGTGAAGTGGGAGGACATGGTGTCCTTATCCAACATGCCCATCCAGATACAGCGCAGTGACGCGGGCGTGTACACAATCGTGACGCCGGTTTACGAGCGACGTAGTGCTGGTGACGCCAAGACCAACCCGGTATTCAAGTTCACGACAGCGGGCATAACCGGGATGGCTGCCTTCCAAGGCCGTCTCGTCTTACTCTCAAATGAATACGTGTGCATGTCCGCGAGTGATAACCCACTGCGCTGGTTCCGCAGTACACTCGCTGCACTGGCGGATAACGACCCTATCGAGGTAGCTGCACAAGGGAGCCTAACAGCCCCGTATGAGTACGCATTGAACTTCAACAAGGACTTGGTGCTCTTCTCGAAACGGTATCAAGGGATTATGCCGGGAAGTGGTATCGTCACACCACGTACAGCCAACCTTGCACTGATGACCCGCTATGACGTGGATGTCAACGCCGAGCCTGTGGCTTGTGGTCGCTCCATGTTCTTTGGCGCACCTCGCAGTCTCGGGTACGTAGGGATGCACGAGCTTACCCCGAGCCAATACAGCGACAGCCAGTACGTAGCGGATGATGTGACGAGTCATATACCCCGGTACGTGCAAGGGCCATTCAGATTCATCGCGGCTAGTACCACGGGCAACCTGATGGTGGCAGGGGCCGCAAACCCCAACGAGCTGCTGGTACATGAATACCTGTGGTCCGGTGCAGAGAAGGTGCACGCATCCTGGCACAAATGGACGTTTGCTTGGCCTGTGGTGGACGTGTACTTCTCCGGCGACGTTATTGTGGCCCTGTTTGGGGTTGCTGGCAAGTTGGTTATATGCCGCGTGGACCTGCAGCGTGGGGCCGGTGACGTCAGCCCGACAGTTGCGCGACTGGACTTCTACACCGACGTTACTTGCGTAGTTCCAGGGGAGTTGACTGTACCCGCCGTGATGTCCTCGTTAGGTGCGGATATTCGCGCCTTTAAGATAGGCGGGGCAAATGCGTACCTGGGGCAGAAGGTGTTCAGTTCTGCACTGGGCACAAGCGGTTTAGTACTCAGCGTCCCCGAGGCGGTTGTAGGGGACAGATACACTGTAGGGTTCCCGTTCGTATCTAGCTGTACGTTGACGCCTGCAGTTATTAAAGACGCCAAGGGCGTGCCGATCACAACTAGCCGAGCAGTCCTCCACCGCTACAGGGTGTCCGTGGCCAACACTGGCCAGTTCGCCTACAACGTCCGCGACGATATCCGGCAAACAGGGGACACCACAACGACCCCGCTACGCCTGTACTCGCAGCAACTTGGCGCTGGCCTGCCGCTAGCCGACTCGGCCACCGTCACAATTCCCGCCCGTGTGGATATGAGTACCGGCATGTTAACCCTGGAGTCCGACGATTACTACGATCTAAATGTGCGTAGTGTTGAGTACGGCTTTAGATACCACCAACGTTTCAGGAGAGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7748597b90c0776dbf59b0d585a00057cc1fbe58e78cd61b2c021c00751886c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3235
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50