Protein

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Genbank accession
QDF17858.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPSISNNPITYGKVMWTAIVSVLDSADPDDIPDLDELEGNIIFKPSARYLKTPASVPPLTIALMNRNVSLEDSQIDEQGRKFIKLEASSAGVVPDVFTWTATFNLSYKGVMVSIPDATFQLLPDDEIDLTDYIAPASPVAPVSPTIDEIFAARNQAVAARDDMVTMLAGIGFGSAEFASITRDFGAINDGSGNATGAFAAALAELSQGGGGTLIVPPGVYSVDTVGLADPVENVDIISPYGSAFIRSRTDEPPLSGSWYRSSVSGLIFDAYNLGGYGANVHMVESKIMDCTFMGWTGRGMSLNDGTYGDLGLLNYILRNHIIQSNGIGIFQTYRFVDSWIDYNNVGSTDANISLEGGPLRVGFNHFNGAPLRNIDLRGNRRITIVGNIGEGAREEAVRYVMPPWLTEDSPQVQLVANSFSNGGKAAAGVHPAIRIQGRGEGMGTRGFLISANNFGCEDAGSGWSNIIHATDVTDLSIVGNQWEGAYMVSPLSGTRVTNFISSGNSSGNT
Physico‐chemical
properties
protein length:511 AA
molecular weight: 54348,22310 Da
isoelectric point:4,48303
aromaticity:0,08611
hydropathy:-0,02701

Domains

Domains [InterPro]
DC_1109
ATT
1–231
DC_1109 DC_0830
IPR011050
STR
179–506
IPR011050
IPR012334
STR
184–500
IPR012334
QDF17858.1
1 511
Architecture
ATT
STR
ATT 1-231 | STR 232-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDF17858.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9900
Central domain 195 500 307 0,9962
C-terminal 501 511 10 0,3054
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-500
C-terminal
501-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Gorko
[NCBI] 		2571248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF17858.1 [NCBI]
Genbank nucleotide accession
MK801728 [NCBI]
CDS location
range 10880 -> 12415
strand +
CDS
ATGCCTCTGCCTAGTATCTCCAACAACCCGATCACCTACGGCAAGGTGATGTGGACTGCTATCGTCTCGGTTCTGGACTCGGCTGACCCCGATGACATTCCAGACCTTGACGAGCTCGAAGGCAACATCATCTTCAAGCCCAGCGCTCGGTACCTCAAGACGCCGGCCTCGGTTCCGCCGCTCACGATCGCACTGATGAACAGAAACGTTAGCCTCGAGGACTCGCAGATAGACGAGCAGGGCCGCAAGTTCATCAAGCTCGAAGCGAGCTCGGCGGGCGTGGTGCCTGACGTATTCACCTGGACGGCGACATTCAACCTGTCCTACAAAGGTGTCATGGTCAGTATTCCTGATGCCACCTTCCAGTTGCTGCCGGATGATGAGATCGACCTCACCGATTACATCGCACCGGCATCTCCCGTCGCTCCGGTGTCGCCAACGATCGACGAGATCTTCGCAGCCCGCAACCAGGCTGTCGCAGCTCGCGACGACATGGTGACGATGCTCGCAGGCATAGGCTTCGGCAGTGCGGAGTTCGCAAGCATCACGCGCGACTTTGGCGCAATCAACGATGGCAGCGGAAACGCGACAGGGGCGTTCGCTGCAGCGCTCGCTGAGCTCAGCCAGGGCGGCGGCGGTACGCTGATTGTTCCGCCTGGCGTGTACTCGGTGGACACCGTCGGGCTTGCCGACCCCGTCGAGAACGTCGACATCATCTCGCCGTACGGCTCGGCATTCATTCGTTCGCGGACTGACGAGCCGCCGCTGAGTGGGTCTTGGTATCGCAGTTCCGTCAGTGGTTTGATCTTCGATGCATACAACCTCGGCGGCTACGGCGCGAACGTGCATATGGTTGAGTCCAAGATCATGGACTGTACATTCATGGGCTGGACCGGCAGGGGTATGTCGCTCAACGATGGAACGTATGGCGACCTGGGTCTACTCAACTACATCTTGCGTAACCACATCATCCAGAGCAATGGCATCGGAATATTCCAGACGTACCGCTTCGTTGACTCGTGGATCGACTACAACAACGTGGGCTCAACGGACGCGAACATCTCGCTTGAAGGCGGGCCGTTGCGCGTAGGGTTCAATCACTTCAATGGTGCTCCACTGAGGAACATTGACCTTCGGGGCAACAGGCGAATCACCATCGTCGGCAACATCGGCGAGGGCGCTCGCGAAGAAGCTGTTCGATACGTCATGCCGCCGTGGCTGACAGAGGACTCGCCCCAGGTGCAGCTCGTTGCGAACAGCTTCTCCAATGGTGGTAAGGCGGCGGCGGGCGTGCACCCAGCCATCCGAATACAGGGACGCGGCGAGGGTATGGGCACAAGGGGCTTTCTCATCTCGGCGAATAACTTCGGCTGTGAGGACGCCGGCTCTGGGTGGAGCAACATCATTCACGCTACCGACGTGACTGATCTCAGTATCGTCGGCAACCAGTGGGAAGGCGCATACATGGTGTCTCCACTTTCCGGAACGAGGGTTACGAACTTCATTTCATCTGGAAACTCCAGCGGTAACACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5cdc41800a2ed6581197b09958f53faec29a91aa428af939b40278b83ce5e05c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8662
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50