Protein

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Genbank accession
AGH56993.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MSTKIIGNQIDAATRAIVTALTVTEQLNLPELNQAAVNALGTPAYGTLVYNSTEDEAQIWKQDVSGSPGWDSVGGGGPSVGENSIIRTNGTTISENLTVGPTANGGVEFTNGFTAAPITIANGYTVTIENGATWTIIGPDENIEAYRYFNNVGVNEHLRMVPGSTLEFGQTKENFIAFAKSGTVTVDHSLATIFITTNPSGYNGNFTINFNNVPNVGGFVYTAQVIIRQQNGTGTVSNVLINGQSTSKYYAASPSSGSGWDIINYFFYVDGENWNVFGNNVQYSV
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30313,96300 Da
isoelectric point:4,39533
aromaticity:0,10526
hydropathy:-0,12947

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM6
[NCBI] 		929832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH56993.1 [NCBI]
Genbank nucleotide accession
HQ634193.1 [NCBI]
CDS location
range 163495 -> 164352
strand -
CDS
ATGTCAACAAAGATTATTGGAAACCAGATTGATGCTGCAACTAGAGCGATTGTTACTGCTCTAACAGTTACAGAGCAACTTAATCTGCCAGAACTTAACCAAGCAGCAGTCAATGCACTTGGTACTCCTGCCTATGGAACGTTAGTATATAACTCTACAGAAGATGAAGCACAGATATGGAAACAAGATGTATCTGGTTCACCTGGTTGGGATAGCGTAGGTGGTGGTGGTCCCTCAGTTGGTGAGAATTCTATTATTAGAACCAACGGAACTACAATATCAGAGAACCTTACAGTTGGTCCTACCGCTAATGGTGGTGTAGAATTTACAAACGGTTTTACTGCTGCACCAATTACTATCGCAAATGGTTACACTGTTACTATTGAGAACGGTGCAACATGGACTATTATTGGTCCTGACGAAAATATAGAAGCATACAGATACTTTAATAACGTTGGTGTTAATGAACACCTAAGAATGGTTCCAGGTTCTACACTTGAGTTTGGACAAACAAAAGAAAACTTCATAGCGTTTGCTAAGTCTGGTACTGTAACTGTAGATCACAGTCTAGCAACAATTTTTATTACTACTAACCCCTCAGGTTATAATGGTAACTTTACTATAAACTTTAATAATGTACCTAATGTCGGTGGTTTCGTGTATACTGCACAGGTAATAATTCGTCAACAGAATGGTACTGGCACTGTAAGTAACGTTCTAATTAACGGACAGTCTACATCTAAATACTACGCAGCATCACCTAGTTCAGGTAGTGGATGGGATATTATAAATTACTTCTTCTATGTTGACGGTGAAAACTGGAACGTATTTGGTAACAACGTACAATACAGTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97a02bed0072563927dc349452cf2c8ee42b820af6ca268c2cfe74ddc7b1057e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6859
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM6 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank