Protein

View in Explore
Genbank accession
XNP00029.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNLANQVKSDSQSAGASATAAAASESAAKTSETNAKASENKAKTSETNAKASETAAKTSETNAKASQNAAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKASENKAKTSETNAKASETAAKTSETNAKASETAANSAKTDAQTAKGQTQNLRDQVVDLVAGVQAPDKLSGVASSSESWMKIANIKNTGSGYAFVQFIIGGGSDYGAANVPVDIFSLSGRGLPSSPLTSENIDTWFTQRTLIAARPNAKRVNLGAVKKADASYDIYLHAPGGWIPSLWLNLLNVQANNGSITGPIIDRTGYSWITTEPTGIVYNSPSDYLLANDSTIPRTNVANTFSQPQAISVPSGNATLTLNGCTVSANNNNVLLLSTPSGSGGMSFRPNGDTNSAKQVVFDASNFTVTGLNANFSNAVTMSSTLRVNGSASLLGGVNVNGSVNSNGVVSKNGDIKTDSGNIELYNASPLIDFYFNKSNADFTARIINDAVDQLTFDCRSVRAMNDFTARGLIRACHNDAFVAWPIEDPNGGNGAILKAPSFISRFNVNGNAARCAMWLEERRGYEHRAVIEVSKWGNSGTTQYWQFKSDGKISSTANGEVVFAGLSDINYKDNVVAYDGLQSLENIKAMNLVKFTYKDDAKKRERRGVIAQQVRNIDSCYVKESNASYQDDEGNVVENKKLVLDNNALLLDAICAIKALSAQVDELKEEIKNLKG
Physico‐chemical
properties
protein length:832 AA
molecular weight: 88115,64940 Da
isoelectric point:5,59611
aromaticity:0,06611
hydropathy:-0,32849

Domains

Domains [InterPro]
DC_0313
STR
1–832
DC_0313
IPR030392
CHP
723–827
IPR030392
IPR030392
CHP
723–773
IPR030392 Coil
XNP00029.1
1 832
Architecture
STR
STR 1-832
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNP00029.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 338 338 0,7467
Central domain 339 537 200 0,5731
C-terminal 538 832 294 0,8332
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-338
Central
339-537
C-terminal
538-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth85
[NCBI] 		3384147 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNP00029.1 [NCBI]
Genbank nucleotide accession
PQ657827.1 [NCBI]
CDS location
range 29489 -> 31987
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACTAAATGGCAATCATCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTCAGTGACACGGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGGCTGGCGCAAGATGTTGCGGAAACCCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAATCTTGCCAACCAGGTAAAGTCGGATTCACAATCCGCAGGCGCGAGCGCTACGGCTGCGGCGGCGTCTGAAAGCGCTGCAAAAACTTCAGAGACCAATGCAAAAGCATCTGAAAATAAGGCGAAGACCTCGGAGACAAATGCAAAGGCATCCGAAACAGCCGCGAAAACGTCGGAGACGAACGCCAAGGCTTCACAAAACGCAGCAAAAACCTCGGAGACCAACGCAAAGGCGTCAGAAACAGCCGCGAAGACTTCGGAGACCAATGCAAAGGCATCAGAAACCGCCGCTAAAACTTCGGAGACCAATGCAAAGGCATCTGAAAATAAGGCGAAGACCTCGGAGACGAACGCTAAGGCGTCAGAAACCGCAGCGAAGACCTCGGAGACCAATGCAAAAGCGTCAGAAACTGCGGCCAACTCCGCGAAGACCGACGCGCAAACTGCGAAGGGGCAGACGCAAAATCTTCGTGATCAGGTTGTCGACCTTGTGGCTGGCGTGCAAGCACCTGATAAGTTAAGCGGGGTTGCTTCCAGCTCCGAATCATGGATGAAGATCGCTAACATCAAGAACACTGGAAGCGGTTATGCTTTCGTTCAATTCATCATTGGCGGAGGTTCTGATTATGGTGCGGCAAACGTCCCGGTTGATATCTTCTCCTTGTCTGGAAGAGGTCTTCCATCCTCGCCGTTGACAAGCGAAAATATTGACACCTGGTTCACTCAACGAACCTTGATTGCTGCCAGGCCAAACGCCAAGCGCGTTAATCTTGGGGCGGTAAAAAAGGCGGATGCTTCATATGATATTTATCTTCATGCTCCGGGTGGCTGGATTCCTAGCCTGTGGTTGAATCTTTTAAACGTACAGGCTAACAATGGGTCGATTACAGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAACCGGGATTGTATATAATTCACCGTCTGATTATTTGCTGGCTAACGATAGCACGATCCCACGAACCAACGTGGCCAACACGTTCAGCCAGCCGCAGGCGATCAGCGTACCAAGCGGAAACGCCACGCTTACCCTGAACGGATGCACTGTTAGTGCCAACAACAATAATGTGCTTTTGCTTTCAACTCCTTCTGGTAGCGGTGGGATGAGTTTTCGCCCAAATGGCGATACGAATAGCGCAAAGCAAGTTGTCTTTGATGCATCAAACTTTACTGTTACCGGATTGAATGCAAACTTTAGCAACGCTGTTACAATGTCAAGCACGCTGCGCGTTAATGGGTCTGCCAGCCTTCTCGGTGGCGTAAATGTTAATGGAAGCGTCAATAGTAATGGCGTAGTGTCAAAAAATGGTGATATTAAAACAGATAGCGGAAACATCGAACTTTACAATGCATCGCCGCTTATCGACTTTTACTTTAACAAATCGAACGCGGATTTCACGGCGAGGATTATCAACGACGCGGTGGATCAGCTAACGTTTGATTGTAGAAGTGTGCGCGCGATGAATGACTTCACGGCGCGAGGGCTAATTAGGGCTTGCCATAATGACGCATTCGTTGCCTGGCCAATTGAAGATCCAAATGGAGGCAATGGGGCTATCCTTAAAGCTCCATCATTTATCTCAAGGTTCAACGTTAATGGTAACGCTGCGCGTTGCGCTATGTGGCTTGAGGAGCGCAGGGGGTATGAACATCGCGCCGTCATTGAGGTAAGCAAGTGGGGTAATAGCGGTACTACGCAGTATTGGCAGTTTAAATCAGATGGTAAAATTTCAAGCACTGCTAATGGTGAGGTTGTTTTTGCTGGCCTTTCTGACATTAACTACAAAGACAATGTTGTTGCTTATGATGGTTTGCAGTCACTCGAAAACATCAAAGCAATGAATCTTGTCAAGTTCACCTATAAGGATGATGCTAAGAAACGCGAGCGTAGGGGGGTTATTGCACAGCAGGTGAGAAATATCGATTCGTGCTACGTTAAAGAAAGCAACGCATCCTATCAGGATGATGAGGGTAACGTAGTTGAAAATAAGAAACTTGTGCTTGACAATAACGCGCTTTTGTTGGATGCAATTTGCGCAATCAAAGCTCTGTCTGCGCAAGTAGATGAACTGAAAGAGGAGATCAAGAATCTGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62dfd3eb4de55c8e8c7c1974eb8aeb011b370ba23afacaa21ac7e37640cfd2bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank