Protein

View in Explore
Genbank accession
YP_012791973.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSDPIQKLRDEQKEFTAILDGASRKMPTKQSAAAVEAATQPASPPPPPTDLVPERTELPPAQLQTPIDASSIGEGWSLGGRITEAPAPPTPQIGVTPTEVLQGVVTPNVEQGLQSQLDQRAINDLEASQATQAVMPYIYQPPSLDAVQQSFGETARWSMQNIEQQNIQARANRDLQLQQQAEWSRQALEFLQSEEGKKGATGDPFDWVKDIVGVKENGRTYLQPWNDKRGFSVPASLLYGLGVVQNSGVGAILDVKALTQFVTRSAPPWAQVDPGRLPGWAQGLLNSADKALSQTLGGANAAIPALLSGDPRRGLFRGIADWLRTPDTRITDKKSNVIEAIRGAQYSFTDEVGTGVGIKVDRGIRVGAAPGKGFGFDVNPSVLVGFGLDVIAGNRADKIIDTGRILFSPVRGAYRMLRGKRSVEAVEQALANVPAPPSSPPVPFVPKQLELPFLPNMPQVVKKKPASEAKILEQTFSSQALAAFKKANQQQAKKIVQMKKAQAAAAAKTEQLSLDLQSVTPVRANQLELDLKVASRPLDDLPTVNVSGRRSRTPTPTKRVQVEPQQLELNFNAASDPVRAAQQVLENLPKTGNPAADAYMRGRVINSLLAEAKQTSESVQQGLDITPDIGRKFVGDAPPSPPAVNVRVGELPTVAVPDAPTFHGTRVEGLNLSVTDPVEGASRSELGTAHYLTTDPDQSRAASLAISSENLPDVEGRIINAPKVVNAQVEPSARLIDAKAPSPQITRIADAVGQEYGVRFSREPMTLIDMFDEASRQLPEVEALQFQRAVVKTLREAGYDGAVAGRTIAVYNPQVIRQTGEAIVDEAEGVIPKLAARADLEGQAVNETGAEFAKAASVDSEVRLASQVAYEAQRLADEVASESVQANELAKLWDDLELPDTNAQVLDFGDDVFETSTEVFYKAPMHDVNAYEYFDILSSTIYKIGDPTYSSSKIAAALDIAEHSPDLAESKAFKQALGDAIEKDMDYWETGGTMSEAEDDLVESVKKLFATIDDMPLDGYPMSTTMKDLGQQSFNQFGMMSEDWWTVVHYYMNSSNSDLANDLAYKLSAFAKSADPDLQNEFFNLVKLNISTINGFTPNKIMTENALLSVLTELKVGAAGDYVNAMGGDPQVAKMLADVETFAGALKTEQTILLNSLLNDFKYYYNLSPTNKSYWDDALGRLKDYWYDHKSLIQGFNAEYEVQKTIADNISVDSRRTIEALIRKYEPSFNPEPAFGSADEIRELIIKVKNPPPHVIERLNGFNRNELVIYAYTDTQTYDVVNQYLRTGVAATAEPYTSMLRLLPDLDVAIRTQPTASGTLYRGVGGLKFTDALEKYKLGEEVTETMFLSTSTKQSVAQSFGAGGTHFVILDAKGYKLHSVASKFLTGESEVLLPRNTKFAVEGIDESTRTITLRQIPNHEFTSYNRISVLYSELQELERQFYRNPDPSIFKAMAERQAELDELVKKSPCEL
Physico‐chemical
properties
protein length:1471 AA
molecular weight: 160673,98790 Da
isoelectric point:4,92308
aromaticity:0,07206
hydropathy:-0,34616

Domains

Domains [InterPro]
DC_2295
STR
1–1253
DC_2295 G3DSA:3.90.176.10
Coil
Unmapped
5–25
Coil Coil IPR050999
SSF56399
Unmapped
1261–1407
SSF56399
IPR000768
RBD
1261–1416
IPR000768
YP_012791973.1
1 1471
Architecture
STR
RBD
STR 1-1253 | RBD 1254-1416 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-1
[NCBI] 		2996049 Uroviricota > Caudoviricetes > Saffermanviridae > Morrisvirus LPP1 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012791973.1 [NCBI]
Genbank nucleotide accession
NC_111528.1 [NCBI]
CDS location
range 20308 -> 24723
strand -
CDS
ATGTCTGACCCTATTCAAAAGCTGCGTGATGAGCAGAAAGAGTTTACCGCCATCCTGGATGGGGCGTCACGCAAGATGCCTACCAAACAATCTGCGGCTGCGGTAGAGGCTGCGACACAACCAGCTTCCCCTCCTCCCCCTCCCACTGACCTTGTGCCCGAACGTACAGAACTTCCACCTGCTCAATTACAAACCCCTATTGATGCGTCAAGCATTGGTGAGGGGTGGAGTTTGGGAGGAAGAATTACCGAGGCACCCGCGCCCCCCACACCACAAATTGGAGTCACCCCCACTGAGGTACTTCAGGGGGTGGTGACACCTAACGTAGAGCAAGGTTTACAGTCTCAGCTTGACCAGCGGGCTATCAACGACCTTGAAGCTTCACAGGCAACTCAAGCTGTAATGCCCTACATCTACCAACCACCATCACTTGACGCAGTACAGCAAAGCTTCGGTGAGACCGCTCGTTGGTCAATGCAAAACATTGAGCAGCAGAATATCCAAGCTAGAGCTAATCGTGACTTACAACTTCAGCAGCAAGCTGAATGGTCCCGCCAAGCCCTTGAGTTCCTCCAGTCAGAGGAGGGGAAGAAAGGAGCTACCGGAGACCCATTCGACTGGGTGAAAGATATTGTGGGGGTGAAAGAGAATGGGCGCACCTACCTCCAGCCGTGGAATGACAAGCGCGGCTTTAGCGTTCCAGCCTCTTTGCTCTACGGGTTAGGCGTTGTACAGAACTCCGGAGTGGGGGCAATACTCGACGTCAAAGCGCTGACTCAGTTTGTCACTCGCTCTGCTCCACCTTGGGCACAGGTTGACCCAGGGCGTTTACCTGGGTGGGCACAAGGTCTGCTCAACAGTGCTGACAAAGCTTTAAGTCAAACGTTGGGTGGGGCTAACGCCGCCATCCCCGCCCTTCTTAGTGGTGACCCCCGCCGTGGGCTATTCCGTGGGATTGCCGACTGGCTACGCACACCGGACACCCGCATCACTGACAAGAAGAGCAACGTCATCGAGGCTATCCGTGGTGCCCAGTACAGCTTTACCGATGAAGTCGGTACTGGTGTGGGCATCAAGGTAGACCGGGGAATCAGGGTGGGGGCTGCTCCAGGTAAAGGGTTTGGCTTCGACGTCAACCCTAGTGTGCTTGTTGGGTTTGGACTCGACGTGATAGCGGGCAACCGGGCAGACAAGATTATTGATACCGGTCGTATACTCTTCTCTCCTGTGAGGGGGGCATACCGGATGTTGAGGGGGAAACGCTCAGTCGAAGCAGTAGAGCAGGCGCTAGCTAACGTACCTGCACCCCCATCTTCCCCTCCTGTGCCATTTGTACCTAAGCAGTTAGAGTTGCCTTTTCTACCTAACATGCCACAGGTTGTTAAGAAAAAGCCCGCAAGCGAGGCTAAGATTCTAGAACAAACATTTAGCAGCCAAGCTTTGGCAGCTTTTAAGAAAGCCAACCAACAGCAGGCTAAGAAGATTGTTCAGATGAAAAAAGCTCAAGCTGCTGCCGCTGCTAAAACAGAACAGTTAAGTCTTGACCTTCAGTCTGTTACGCCAGTACGCGCCAACCAATTAGAGCTTGACTTAAAGGTAGCGTCTCGACCTCTTGACGATTTGCCCACTGTTAATGTGTCTGGTAGACGTTCGCGCACCCCTACACCTACTAAGCGTGTACAGGTTGAACCTCAGCAGTTAGAGCTGAATTTTAACGCAGCGTCTGACCCGGTTCGGGCTGCTCAACAGGTGCTAGAGAATCTACCTAAAACTGGCAACCCTGCGGCAGACGCTTATATGAGGGGGCGGGTTATCAACTCACTGCTGGCAGAAGCTAAACAGACAAGCGAGTCAGTACAACAAGGGTTAGACATTACCCCAGATATCGGGCGTAAATTTGTAGGTGATGCCCCGCCTTCCCCACCTGCTGTTAATGTGCGCGTAGGTGAGTTGCCAACAGTAGCTGTACCTGACGCCCCTACCTTTCATGGTACCCGTGTGGAGGGGTTAAACCTCTCAGTGACTGACCCTGTGGAGGGGGCATCTCGTAGCGAGTTGGGGACAGCCCATTACCTGACGACTGACCCTGACCAATCACGGGCGGCGTCGCTTGCTATCTCATCTGAGAACCTCCCAGATGTGGAGGGGCGGATAATCAACGCCCCCAAGGTTGTCAACGCACAGGTTGAACCTAGCGCTCGTCTCATCGACGCTAAAGCTCCATCCCCCCAGATTACCCGTATAGCTGACGCTGTTGGTCAAGAGTATGGGGTACGCTTTAGTCGCGAACCTATGACCCTCATAGACATGTTTGACGAAGCGTCACGCCAGCTACCTGAGGTTGAAGCTTTGCAATTTCAACGAGCGGTGGTTAAGACGTTGCGGGAAGCAGGGTATGACGGGGCTGTAGCCGGTCGTACGATTGCCGTGTACAACCCACAAGTTATTCGACAAACTGGGGAGGCAATAGTCGATGAAGCTGAGGGTGTAATCCCTAAACTTGCAGCACGCGCAGATTTGGAGGGGCAAGCTGTAAATGAAACTGGGGCTGAGTTTGCTAAAGCAGCAAGTGTGGACTCTGAAGTACGGCTGGCATCCCAAGTAGCCTATGAAGCTCAACGTTTAGCCGATGAAGTAGCAAGCGAAAGCGTACAGGCTAATGAACTAGCTAAGCTATGGGACGACCTTGAACTACCTGACACTAACGCTCAAGTTTTAGATTTTGGCGATGACGTGTTCGAGACGTCTACCGAAGTGTTTTACAAAGCACCGATGCATGACGTAAACGCTTATGAGTACTTTGACATTCTGTCTTCCACCATCTACAAGATTGGCGACCCCACCTATAGCTCTAGTAAGATAGCCGCTGCGCTCGACATCGCAGAGCATAGCCCCGACTTAGCAGAGTCTAAAGCTTTTAAGCAAGCACTCGGTGACGCTATTGAAAAAGATATGGACTACTGGGAGACTGGGGGTACCATGTCCGAGGCTGAAGACGATTTGGTCGAGTCAGTGAAGAAACTCTTTGCCACTATCGACGACATGCCGCTTGATGGCTACCCCATGAGTACCACCATGAAAGACCTAGGGCAGCAGTCTTTCAACCAGTTTGGTATGATGAGTGAAGATTGGTGGACAGTTGTGCACTATTACATGAACTCTAGTAATAGCGATTTAGCTAACGACTTAGCCTATAAGCTATCAGCATTTGCTAAAAGCGCCGACCCTGACCTTCAGAACGAATTCTTCAACTTGGTCAAGTTAAACATCTCGACCATTAACGGGTTCACCCCCAACAAAATCATGACTGAGAATGCGTTACTCTCAGTGTTGACAGAATTAAAGGTGGGGGCAGCGGGAGACTACGTAAACGCGATGGGGGGAGACCCACAGGTTGCAAAAATGCTGGCGGATGTAGAGACATTTGCAGGTGCTCTAAAGACTGAGCAAACTATCTTGCTTAACAGTTTGCTCAACGATTTTAAGTATTACTACAACCTCTCCCCCACCAATAAAAGCTACTGGGACGATGCGTTAGGGCGGCTTAAGGATTACTGGTATGACCACAAGTCATTAATCCAAGGGTTCAACGCTGAGTACGAGGTCCAGAAAACTATCGCTGACAACATTAGTGTAGATAGCAGGCGCACTATTGAAGCGCTCATTCGTAAGTATGAACCAAGCTTTAACCCTGAACCTGCCTTTGGGTCAGCAGATGAAATCCGTGAGCTTATCATCAAAGTTAAGAACCCGCCACCACACGTCATAGAGCGCCTTAACGGGTTCAACCGCAACGAGCTAGTCATCTATGCTTACACCGATACACAGACGTACGACGTTGTTAATCAGTATTTACGGACGGGTGTTGCTGCCACAGCAGAACCTTACACGTCTATGCTTCGACTATTGCCTGACTTAGACGTAGCAATCCGTACGCAGCCTACTGCCAGTGGTACACTCTATCGTGGTGTAGGGGGTCTAAAGTTTACCGACGCCCTTGAGAAATATAAACTGGGGGAGGAAGTCACTGAGACAATGTTCCTCAGTACCTCTACTAAGCAGAGTGTAGCCCAGAGTTTTGGGGCAGGTGGTACGCACTTCGTCATACTTGACGCAAAAGGCTACAAACTGCATAGCGTCGCTTCTAAGTTTTTAACGGGGGAGAGTGAGGTACTGTTGCCGCGTAACACTAAGTTTGCAGTAGAGGGTATCGACGAATCAACCCGTACTATCACTTTGCGCCAAATTCCTAACCACGAGTTCACGAGCTACAACCGTATCTCGGTGCTGTACAGCGAACTACAAGAGCTAGAGCGTCAGTTCTACCGCAACCCTGACCCCTCAATCTTTAAGGCTATGGCTGAGCGTCAAGCTGAGCTAGACGAACTTGTCAAAAAATCACCCTGCGAGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
264298df3435604b6a38982fa08b601c87234730555fa75dae780b2057365f0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank