Protein

View in Explore
Genbank accession
QQO88988.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPKKTAPNQGLPYGWIRGEDYWGGPMSDSQIFLDTTLFLTLESLTFSAPPPNAVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYTPRYGWRARVRSYEKFLWFNGTTWLDEATGEDPVNPEPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFSTTGGNPVSFAAGDRLTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27104,14110 Da
isoelectric point:4,74466
aromaticity:0,13415
hydropathy:-0,23902

Domains

Domains [InterPro]
DC_0494
STR
1–245
DC_0494
IPR021251
STR
32–111
IPR021251
QQO88988.1
1 246
Architecture
STR
STR 1-245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_BPS4
[NCBI] 		2801549 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO88988.1 [NCBI]
Genbank nucleotide accession
MW355476.1 [NCBI]
CDS location
range 35061 -> 35801
strand -
CDS
ATGCCGAAAAAGACAGCCCCGAATCAGGGGCTACCCTACGGGTGGATTCGCGGGGAAGACTATTGGGGTGGCCCGATGTCCGACTCGCAAATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCTAACGCGGTGGACGGGGCCACCTACGTCGTCGCGGCTAACCCGACGGGGGCGTGGGCCGGGCATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACACGCCTCGCTACGGGTGGCGCGCTCGCGTTCGTTCGTACGAGAAATTCTTGTGGTTCAATGGCACGACGTGGCTTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGAACCTGACCCGAGCGTTAAGCCGAAATGGTACGACATCGGCGTGACCGTGTCGGACAGCATGTACGCGAATGAACCCGTCGTGCATCTGCCGATCCTTGACCCGATGTATCTGCCTGCCAATATGGTTGGCTCACAGTTCGACATGGCCGACGGCGCAAGCCCGGCCTATTACCAGTTCCGCGTGCAGCGTAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGTAACTTCAACGCATCGTTTTCCACGACCGGGGGCAACCCGGTATCATTCGCAGCCGGGGATCGCCTGACGGTTCGCGCGCAGCAGGAAGCCGTCGCGGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
348772a49158b89cc5a43b3565be6d932925cc37211300190525a7957f192ff7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank