Protein

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Genbank accession
WPK28002.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALYRTGTAAMDAQGVITGTGTKWREPLSLIRTGATIVFLTSPLKLAVISDIVSDTEMKAIQTDGEQVANGNYVILLNDSLTVDGMAQDVAETLRYYQSKETVIEEAIEFFKNFDLKTLQDLVNKVNADAQQVANDKAATEQLKNETQHIKDSAVSETQQIKDAAVNETNQIKADTDAIKTQTQQIKDSAVSEIGSIKNESVNARDAAKESQLAAEQSKIAADSAKAGAETARDEARQWAQQVNPENLLHKDQNLNDLANKDLAREALKVEAVNSVKGQNPGDYNSFRNPAWTYELRIANNGEWRVARNSDNSTSALSVGAGGTGAENVSQARNNFGIGEADIPVFRGISLTEKNSANSGVLYLINKSPEDVQLSYSRIYNEIQGGLAKSTIQVTREGGDTNYYQFDESGNAINYNSIVIGRGIGNALGSNALVIGDTDTGFRWGGDGILQVMCNGRNIATCQANDFNMYGLLTIWPISDDANGIRVAGIRSGGASAMIGGQIQGGAFTAWRDRGAGMLCEITAKDAAVNVFKVVHWGDDWITGMDAVNWSSGGAETHLYVKGGEFIFNNVGNATCNQWISTSDIRMKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNNDGQIDPKGEAIKGINYNGVVALLVNAFKEQKEKIEKQQEEIKELKNEIAEMKAAIAEMQAMLVQLTK
Physico‐chemical
properties
protein length:714 AA
molecular weight: 77576,45180 Da
isoelectric point:4,80150
aromaticity:0,06443
hydropathy:-0,39664

Domains

Domains [InterPro]
DC_0313
STR
1–714
DC_0313
Coil
Unmapped
116–136
Coil IPR030392
IPR030392
CHP
583–643
IPR030392 Coil
cd14686
Unmapped
677–709
cd14686
WPK28002.1
1 714
Architecture
STR
STR 1-714
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK28002.1
1 714
Domain Start End Length (AA) Confidence
N-terminal 1 446 446 0,6958
Central domain 447 645 200 0,2827
C-terminal 646 714 68 0,9562
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-446
Central
447-645
C-terminal
646-714

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB-Eco-KMB25
[NCBI] 		3079605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK28002.1 [NCBI]
Genbank nucleotide accession
OR424386.1 [NCBI]
CDS location
range 23690 -> 25834
strand -
CDS
ATGGCTTTATATCGAACTGGTACGGCTGCAATGGACGCGCAAGGCGTTATTACTGGTACTGGCACAAAATGGCGTGAGCCTCTTTCTCTTATCCGCACTGGCGCAACAATCGTATTTCTCACATCGCCTCTTAAATTGGCTGTGATTAGCGATATTGTAAGCGACACGGAAATGAAAGCGATCCAGACTGACGGCGAGCAAGTAGCAAACGGAAATTATGTGATCCTGTTGAATGACTCGCTAACTGTCGATGGAATGGCGCAAGATGTAGCGGAAACGCTGCGTTATTACCAAAGTAAAGAAACGGTAATTGAGGAAGCAATTGAATTCTTTAAAAACTTCGATCTGAAAACATTGCAAGATTTAGTTAACAAGGTTAATGCTGATGCTCAACAGGTAGCAAACGACAAAGCGGCAACTGAGCAACTAAAAAATGAAACGCAACATATTAAGGATTCTGCTGTATCTGAGACTCAACAGATTAAGGATGCTGCCGTCAATGAAACCAATCAGATTAAGGCGGACACTGACGCAATAAAAACGCAGACGCAACAAATAAAAGATAGCGCCGTTTCTGAAATTGGATCAATTAAAAACGAGTCTGTTAATGCTCGCGATGCAGCAAAGGAATCACAACTTGCCGCTGAACAATCAAAGATTGCCGCCGACTCTGCAAAGGCTGGCGCTGAGACTGCGCGTGATGAAGCTCGCCAATGGGCACAACAAGTTAACCCTGAAAACCTTCTGCATAAGGATCAGAATCTTAATGATCTTGCTAATAAAGATTTAGCAAGGGAGGCGCTGAAAGTTGAGGCTGTTAATTCAGTTAAGGGGCAAAATCCAGGTGATTATAACTCATTTCGTAACCCTGCATGGACTTATGAATTACGGATCGCAAACAACGGCGAGTGGCGAGTTGCAAGAAATAGCGATAACAGCACATCCGCTCTTTCTGTTGGTGCTGGCGGTACTGGTGCGGAAAACGTAAGCCAAGCAAGGAATAACTTTGGCATTGGTGAGGCTGATATACCTGTTTTTAGAGGAATAAGCCTAACAGAAAAAAACTCTGCAAACTCTGGAGTTCTTTATTTAATAAACAAAAGTCCAGAAGATGTACAGCTTTCATACTCAAGAATTTACAACGAAATTCAAGGTGGATTAGCAAAATCAACAATACAAGTCACTAGGGAAGGAGGTGATACAAACTATTATCAATTTGATGAAAGCGGTAACGCGATAAATTACAATTCAATAGTTATCGGTAGGGGTATTGGTAATGCGCTTGGAAGTAATGCGTTAGTAATTGGTGACACTGACACAGGTTTTAGGTGGGGCGGTGATGGCATTTTGCAAGTAATGTGCAACGGTAGAAATATTGCAACATGCCAAGCTAATGATTTTAACATGTACGGGTTATTGACTATATGGCCTATTAGTGACGATGCAAACGGCATTAGGGTTGCTGGCATTAGGTCTGGTGGGGCAAGTGCCATGATTGGCGGTCAAATTCAGGGAGGCGCTTTTACTGCTTGGCGTGATCGTGGTGCTGGAATGCTTTGCGAGATTACAGCAAAAGACGCAGCCGTTAACGTATTTAAGGTTGTTCATTGGGGTGATGATTGGATTACTGGAATGGATGCCGTTAACTGGTCGAGTGGCGGTGCTGAAACTCACCTTTATGTAAAGGGTGGAGAATTCATTTTCAATAACGTTGGAAATGCTACTTGTAACCAATGGATTAGCACATCTGACATAAGGATGAAAGCACATCTAAAAGAGATCGAAACAGCATCCGACAAAATTGATTATCTAACTGGTTATACTTACTACAAGCGCAACAATCTAATTGAAGATGAAAACAGCGTTTATAGCATTGAGGCTGGATTGATCGCACAAGATGTTGAAAGGGTTTTGCCGGAAGCGGTTCATTCTTTGAATAATGATGGTCAGATAGATCCAAAAGGCGAGGCAATCAAAGGCATTAACTATAATGGCGTTGTAGCTCTTTTGGTTAACGCATTCAAAGAGCAGAAAGAAAAAATAGAGAAACAACAGGAGGAAATTAAAGAGTTGAAAAACGAGATCGCAGAAATGAAAGCCGCAATTGCGGAAATGCAAGCAATGCTTGTTCAGCTTACTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23cc272adabd0bb31224ab4f4de119965cb3b5a783b36a9c46c533cd19730249
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50