Protein

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Genbank accession

CAH1084078.1 [GenBank]

Protein name

aliphatic sulfonates transport permease

RBP type

TSP

Evidence DepoScope

Probability 0,54

Protein sequence

MSKDINIVSRGTKQVGQRLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLLISGELWQHVKVSAGRALLGLFIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALIPLVILWFGIDETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEIILPGAMPSILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLAQLLERYLLRWHAGYQK

Physico‐chemical properties

protein length:	265 AA
molecular weight:	29186,52190 Da
isoelectric point:	9,65119
aromaticity:	0,09811
hydropathy:	0,74604

Domains

Domains [InterPro]

NF008470
Unmapped
11–264

NF008470

PTHR30151
Unmapped
14–261

PTHR30151

IPR035906
STR
56–258

IPR035906

G3DSA:1.10.3720.10:FF:000003
Unmapped
62–256

G3DSA:1.10.3720.10:FF:000003

IPR035906
STR
63–245

IPR035906

IPR000515
STR
65–249

IPR000515

IPR035906
STR
70–235

IPR035906

IPR000515
STR
85–254

IPR000515

IPR000515
STR
98–244

IPR000515

CAH1084078.1

1 265

Architecture

STR

STR 56-258 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
NF008470	Unmapped	-	11	264	NCBIfam	aliphatic sulfonate ABC transporter permease SsuC	-	-	-	-
PTHR30151	Unmapped	-	14	261	PANTHER	ALKANE SULFONATE ABC TRANSPORTER-RELATED, MEMBRANE SUBUNIT	-	-	-	-
IPR035906	STR	IPR035906	56	258	Merged direct domain	MetI-like superfamily	Central	Low	Positional only	54 proteins / 54 hits
G3DSA:1.10.3720.10:FF:000003	Unmapped	-	62	256	FunFam	Aliphatic sulfonate ABC transporter permease	-	-	-	-
IPR035906	STR	IPR035906	63	245	Merged direct domain	MetI-like superfamily	Central	Low	Positional only	54 proteins / 54 hits
IPR000515	STR	DC_0022	65	249	InterPro cluster	ABC transporter type 1, transmembrane domain MetI-like	Central	High	Text match	57 proteins / 169 hits
IPR035906	STR	IPR035906	70	235	Merged direct domain	MetI-like superfamily	Central	Low	Positional only	54 proteins / 54 hits
IPR000515	STR	DC_0022	85	254	InterPro cluster	ABC transporter type 1, transmembrane domain MetI-like	Central	High	Text match	57 proteins / 169 hits
IPR000515	STR	DC_0022	98	244	InterPro cluster	ABC transporter type 1, transmembrane domain MetI-like	Central	High	Text match	57 proteins / 169 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CAH1084078.1

1 265

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	263	263	0,7436
Central domain	264	263	1	0,2325
C-terminal	264	265	1	0,6689

Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (1 AA) is still below minimum (10 AA). Sequence may be too short.

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-263

Central
264-263

C-terminal
264-265

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Acinetobacter phage MD-2021a [NCBI]	2899278	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAH1084078.1 [NCBI]

Genbank nucleotide accession

CAKLQH020000009 [NCBI]

CDS location

range 9907 -> 10704
strand -

CDS

ATGAGCAAAGATATAAATATTGTTTCACGTGGAACGAAACAAGTCGGGCAGCGTCTGCTGCCTTGGATTTTTCCGATTGTTCTATTGGTTGTTTGGCAAATTGCATCGAGTTCAGGGCTTTTAGAAAATCGTATTCTGCCGGCTCCTACGGCTGTCGTTTCTGCTTTTTGGCATCTACTCATTAGCGGCGAGCTTTGGCAGCACGTTAAAGTCAGTGCAGGACGGGCCTTACTCGGACTATTTATTGGTGGTGGTTTAGGTTTGTTATTGGGTCTGCTCAATGGGTCTTCTCGTTTCGCCTCTACCCTGCTCGATACAACCTTGCAAATGATTCGTAACATCCCAGCATTAGCACTTATTCCACTGGTTATCTTGTGGTTCGGTATTGATGAAACAGCCAAATTATTTTTGGTGGCGGTCGGAGTCTTCTTCCCTATTTATATCAACACGTATCACGGTATCCGTTCAGTCGATCCACAATTAATTGAGATGGGTAAAAGCTATGGTCTTTCACGTTGGCAGCTTTACAAAGAAATTATTCTACCGGGTGCGATGCCCTCGATTTTAGTTGGTTTACGTTTTGCTTTAGGTCTGGTTTGGGTGCTGCTCATTGTAGCTGAGACTATTTCAGCACAAGCAGGTATTGGCTATATGACTATGAATGCACGAGAATTTTTGCAAACAGATGTAGTTCTGGTCGGTATTCTTCTTTATGCCCTATTAGGCAAATTAGCCGATGTTCTAGCGCAACTTTTAGAACGTTATTTACTACGCTGGCATGCCGGTTATCAAAAATAA

Genome Context

Tertiary structure

PDB ID

db1696fbd72c9f90ddeea377232f409842eb38e39b21c48d9451fb3808580e46

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,9698

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence