Protein

View in Explore
Genbank accession
YP_009610379.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNILRSFTETVVTTPTDTFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKVEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFKQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAANAAEVAASQTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTIANNTSDPNIDMTGWVKVNSVSQIFDETYNITQSVINGNLVTVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTAFINCGPTIQNLTARCSNGAGKQVSFIEIDGYLANISYVAIVNFYNQIVVKEALVGFNINNAWLYYSQNAGIYCEDPNNHVSTTGTFHNIYFQLGDGYAMIFDRDIHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLSTNNYGGVSVSAEGISIVNAGNKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADSSGAQYLAPDTYTKLSRKWGTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWKIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTGAGATHGIQMIETYAGSWTSYTEAAGFKVFWRDSSNALVDPHRFTVAFTATS
Physico‐chemical
properties
protein length:699 AA
molecular weight: 76071,07850 Da
isoelectric point:5,11786
aromaticity:0,10587
hydropathy:-0,19371

Domains

Domains [InterPro]
DC_0704
ATT
44–275
DC_0704 DC_0160
Coil
Unmapped
122–149
Coil IPR012334
IPR011050
STR
222–557
IPR011050
IPR024535
ENZ
225–432
IPR024535
YP_009610379.1
1 699
Architecture
ATT
STR
ATT 44-275 | STR 276-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009610379.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9948
Central domain 241 530 291 0,9896
C-terminal 531 699 168 0,9704
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-530
C-terminal
531-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_B3
[NCBI] 		2016050 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009610379.1 [NCBI]
Genbank nucleotide accession
NC_042004.1 [NCBI]
CDS location
range 33898 -> 35997
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGATACTTTCCCTATCAGTTTTGAATATGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTGGCAGTTGAAGACTTGGGGTACACGGTATCTCAAGTCAATGCTGTTACTCTAAAAGTTGAACCTGCTATTCCAGAAGGTACTGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTATTCATTGACCAGAATGTGGATGCAGATTTTAAACAAATCGTACACTCTCAGCAAGAGGTGCGTGATGGTTTTATTAAACTACGTGGTGATGTATTACCATTAGTACATGGTTTACAAGAAGCTTTGCAACAAGCACAAGAGGCTAGTGAAGCTGCTCAAGAGGCTGCTAATGCAGCAGAAGTAGCTGCTTCACAAACACAGTACTACTTAAAGTACTTCAACCCTGAAATAGTGTACCCTAAAAATGCGCGCATTATGCTTGATAATGGCGATATTGTTCGCTCTACCATTGCGAATAATACATCTGATCCGAATATTGATATGACTGGATGGGTAAAGGTTAATTCTGTTAGTCAGATTTTTGATGAAACTTACAATATCACCCAATCAGTAATTAATGGAAATCTAGTTACTGTTGATAATTTTGGCGCAAAGGGTGATGGGGTTACAGATGATAGCGCAGCTTTTCAAGCATATTGTGATAGTGCTTTAACTGGACAAAATCTATATCTTGGGGCAAAAGGTCGCTACATCATCAAGAATCAAGTAGACCTAAAAGGTAAAGGTTTGGTTGGCAACGGGTGCGGAAAGGTTAGTGAGTTCTACTACAACTTAGGTTGTATTGATGTTGATGGCTCCAGCCCTGATCTTCAAGGTAAAACGGCATTCATTAATTGTGGTCCTACAATCCAAAATCTTACTGCAAGATGCTCTAATGGAGCAGGGAAACAGGTCTCATTTATTGAAATAGACGGCTATCTAGCCAATATTTCTTATGTCGCAATTGTAAACTTTTACAATCAAATCGTAGTAAAAGAGGCGCTAGTAGGCTTTAACATCAATAATGCTTGGCTCTACTACTCTCAAAACGCTGGTATCTACTGCGAAGACCCTAATAACCATGTAAGTACAACTGGAACATTTCACAACATTTATTTCCAGTTGGGTGATGGTTATGCAATGATTTTTGATAGAGATATTCATGGGTGTGATTTCGATAATATTATATTCGAATCTATGAATGGAGGTATCAAGGCTCGAACAGTAGCACACTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCTACATCCAAAGATTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGGAATAGCTTTACTGGCTATGTTAAATTATTAGGCGGGTGGACGTCGAAAACATCACCAACGCTAGACTCTTTGTCAACAAATAACTATGGTGGTGTATCGGTTAGTGCAGAGGGTATCTCTATTGTTAATGCGGGCAATAAAGCAAAAATGCTTATGCTGCCAAGTGGTTTTAAGACTGGCAACGCAACGATTGATGAAACGCACATTAGCTCATCTACAGTAACACCCTTAGTTAAGAGACGTGTTATTGGCGCAGATAGCTCTGGAGCACAATACCTTGCACCAGACACCTATACAAAGCTTTCTCGCAAGTGGGGAACATATAACCACGGATCAAATAACGCGGGTGCATTCTATGCACCAATGATGCTTACTTACGATCAGTCATTTAGCACACCACAAAACAATAATGGTTGGAAAATCGTTAAAGAATCTACTGGCGTTTATCGGGTTGAACGTGTTTCTGGGAATACTTCGGTAATCACAAATGGGCACATTGTTGTTGGCTCGCCATTAATGGGTTCTCGTTTGGGGACTGGAGCAGGTGCTACGCATGGAATTCAAATGATTGAGACCTATGCAGGTTCGTGGACTTCTTACACAGAAGCGGCTGGTTTTAAAGTGTTTTGGAGAGATTCTAGCAATGCCCTAGTCGATCCTCATAGATTTACAGTCGCATTTACAGCAACGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
696d0982d3a28055e7c1ea61c69f05c7898dbcccc35c889774fe87606ee1b8a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sensitivity acquisition of phages to Acinetobacter calcoaceticus-baumannii complex species through exchange of pectate lyase domains Oliveira,H., Rita,A., Konstantinidis,N., Dotsch,A., Ferreira,A., Akturk,E., Nemec,A., Sillankorva,S., Shneider,M. and Azeredo,J. 2021-06 — GenBank