Protein

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Genbank accession
XYA29284.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFSQPGGSVSKDVNKQSIARVYGVKMSEVAYLKAGLVLNGYKVLFDKTTQTCWKSGNATGTSISWQVSGSSLNLVTTTGSYVLPLFDILANLGSGEGLLHIGSVATIAQLSTVSPVTVGQRIQVTEYALGYVVGGGNFIVQKSSDYTVDGGKVVASATSGLVFVREEYYASRTVKPEWYGCRGKGSAIPDTVPFKTMLGALVNGDYIRLMANAVYYNSFPNNSQAIDGWTITADNITLDGVGGATLSRATPSSASYSGFTTLKIAGSKNPRLVGSLLITSDDPTNRPLYAYQSLTKIDSREIFTSPLANTLGLWASGVDGLYIDKSVILERAVFPYFANNGTKNKKVFCTARKSGQIYPQPTSASSDLALGSTFKLDACSDFIMEVVANDSAYAGIESESNNVNGSITLVTNRAYHAGLHLWNRCKNITYKVSATDIVEGGGVITGYGCEACSGDVTAYNAQYVAAFIGNSATTPVISCNVKGSGYGVTDAVVFYTTAANNAYIQHCNVDITAVHADVFSIGTGRQSAIKFNGGQYCDIKVNAKDFDYIFSLGMGANNKFNVAYNAFNTAFSYSDQRSFDNEYKYTDPAGSVYHLQAKGSSYEYRSDAVTNPVLGYKALLRKQIVTDGFVNPNLPQTTASVGGFYYDPTTKYVRVNL
Physico‐chemical
properties
protein length:660 AA
molecular weight: 70637,41850 Da
isoelectric point:8,29478
aromaticity:0,11061
hydropathy:-0,07424

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–92
G3DSA:3.30.2020.50 IPR059934 DC_0726
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50
XYA29284.1
1 660
Architecture
ATT
RBD
STR
ATT 1-100 | RBD 101-168 | STR 169-660
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29284.1
1 660
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,9922
Central domain 193 613 422 0,9709
C-terminal 614 660 46 0,8862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-192
Central
193-613
C-terminal
614-660

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM-Bestiario
[NCBI] 		3447922 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29284.1 [NCBI]
Genbank nucleotide accession
PV891801.1 [NCBI]
CDS location
range 115872 -> 117854
strand +
CDS
ATGAATCCACAATTCAGTCAGCCCGGCGGTTCCGTCTCTAAAGACGTGAACAAACAATCTATCGCACGTGTATACGGCGTTAAAATGAGCGAAGTGGCTTATTTGAAAGCCGGATTAGTATTGAATGGTTATAAGGTGTTGTTTGATAAAACAACCCAAACTTGTTGGAAAAGTGGCAACGCTACAGGTACATCGATTTCCTGGCAAGTCTCTGGTAGCTCTCTGAACTTAGTAACTACTACTGGCTCGTATGTACTACCCCTTTTTGACATACTTGCAAACCTTGGTTCAGGCGAGGGACTTCTTCACATAGGAAGTGTAGCTACCATTGCTCAATTATCCACAGTCTCCCCCGTAACGGTAGGTCAGCGCATACAAGTTACCGAATATGCTTTAGGTTATGTAGTAGGTGGTGGTAACTTTATTGTACAAAAGTCATCTGATTATACGGTTGACGGTGGGAAGGTAGTGGCATCCGCAACGTCGGGGTTGGTCTTCGTACGTGAGGAATACTATGCGTCCCGCACTGTTAAGCCCGAATGGTACGGTTGTCGTGGTAAAGGCTCGGCCATACCCGACACAGTTCCGTTTAAAACGATGCTCGGTGCCCTTGTTAATGGCGACTACATCAGATTGATGGCCAATGCTGTTTATTACAATAGCTTTCCCAATAATTCGCAGGCAATAGATGGGTGGACAATAACCGCCGATAATATCACATTAGACGGTGTGGGCGGCGCCACCCTGTCCCGCGCAACACCTTCATCAGCAAGCTACTCTGGTTTTACCACGCTCAAGATTGCCGGCAGTAAAAACCCGAGACTGGTGGGGTCACTGCTCATCACCTCTGATGACCCCACCAACAGGCCTTTATACGCATACCAAAGTTTGACCAAAATCGACTCAAGGGAGATTTTCACATCTCCCTTGGCCAATACGCTGGGCCTGTGGGCGTCTGGCGTTGATGGCCTTTATATCGATAAATCGGTAATACTGGAAAGAGCTGTCTTCCCTTACTTCGCCAATAACGGCACAAAGAACAAAAAGGTGTTCTGCACTGCCAGAAAATCAGGTCAGATTTACCCGCAGCCGACGTCAGCAAGTTCAGATTTGGCACTCGGTAGTACCTTCAAGCTGGATGCGTGTTCCGACTTTATCATGGAGGTTGTTGCCAATGATTCGGCATATGCAGGCATTGAGTCTGAGAGTAACAACGTCAATGGCAGCATAACCCTAGTAACCAATAGGGCGTACCATGCCGGACTCCATTTATGGAACAGATGTAAGAACATTACTTACAAGGTCTCCGCGACGGATATCGTTGAGGGGGGTGGCGTTATTACAGGGTATGGTTGCGAGGCATGTAGCGGTGACGTTACAGCCTATAACGCACAATACGTCGCGGCATTCATAGGAAATTCCGCAACAACCCCCGTTATAAGCTGTAACGTAAAAGGCTCTGGGTATGGCGTGACTGATGCTGTTGTATTCTATACAACGGCTGCGAATAATGCCTATATCCAGCACTGTAACGTGGATATTACTGCTGTGCACGCTGATGTATTCTCCATCGGCACTGGCCGACAATCAGCTATCAAGTTCAATGGCGGGCAGTACTGTGACATCAAAGTAAATGCCAAAGATTTTGACTACATATTTTCACTTGGCATGGGGGCAAATAACAAATTTAATGTTGCATATAATGCATTCAATACAGCGTTCTCGTACTCAGATCAACGATCTTTTGACAATGAGTATAAATACACTGACCCTGCTGGCAGTGTGTACCATTTGCAGGCAAAGGGAAGTTCTTATGAGTACAGGTCAGATGCTGTCACTAACCCGGTTCTTGGGTATAAGGCACTGCTAAGGAAGCAGATAGTTACAGATGGGTTTGTTAACCCGAACCTGCCACAAACAACTGCATCGGTGGGTGGTTTTTACTATGACCCAACCACGAAATATGTAAGGGTTAATCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7122a7126e909bea18eef49245661203ede2fb7968cf355834257d2bfaa07acb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8538
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank