Protein

View in Explore
Genbank accession
YP_009600510.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTNPTLITTPFAENGDKNIIPESVGANPQNATMQAGFPPITQQKISEGGIPPERNDFNGMFNLVTQHLVHLNNGMSYEFDQEHADKIGGYPLNARLMLDNGEIVRSTVPNNTTNPNVDMTGWEVKLPADLIKDSSGKSQQEVNNSLKLKTFDDLKNFKPIVNGQTVYVGQRSNTYLQGGGFFYADTSDTTSSDNDGTILVGIDGTRWKRKWNTHADPCWFGADYTGAVDCSPQVQKAVDVSYGRVWFGNADRNFKMMTPVGLPTNSIVGDMLMEICGDGARIWVYSNTGIFTSKRSIGLETSTDDLYTAALEIGRGLRFQGDGTSQSVVVNGDRLYNVNMKGGRYLRISALVRATQPRRSETTGYVQSVTIEGNHLALCNRIIDSKRGFNVTVSRNFGESCYGGVYLDGDGSPAVNVIRCDGNLWESSGVFAKLGAVYAGTFIGNYFEGNNTGDLPTLKCLIELGKTGTTGYSSGVTFIGNQFGAAAAYKTDVNYADVKFTASLSGTNLDVLAPPTFIGNWTNAYRMWSEGQVVTQFGNAFSGGNARRHQAPKLHTEARVTFDLSRKEFLSSTNLVGGVHTVAEIDTNLISNLASQSSRACTADMNIFMQMKNASNVVLGAAVAKVSLVVQGSEGIGTGATTDVYVAASLTGFTQLEGGVIDTVNNVSLFKHFTSPVLTIERVGTKYLLKLSGYVAASGSVYGSTSKVFSNTTMTIYSLNSGASVAGQIYPT
Physico‐chemical
properties
protein length:732 AA
molecular weight: 78765,28810 Da
isoelectric point:6,05309
aromaticity:0,09153
hydropathy:-0,21448

Domains

Domains [InterPro]
DC_1737
ATT
23–120
DC_1737 cd20481 DC_0935
YP_009600510.1
1 732
Architecture
ATT
STR
RBD
ATT 23-120 | STR 150-553 | RBD 554-732
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009600510.1
1 732
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9939
Central domain 232 543 313 0,9916
C-terminal 544 732 188 0,9898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-543
C-terminal
544-732

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage WCHABP12
[NCBI] 		1965454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600510.1 [NCBI]
Genbank nucleotide accession
NC_041924.1 [NCBI]
CDS location
range 11145 -> 13343
strand +
CDS
ATGACCAATCCAACACTCATTACAACCCCATTCGCTGAAAATGGCGATAAAAACATTATTCCCGAATCGGTTGGCGCTAATCCTCAAAATGCAACTATGCAAGCTGGATTCCCGCCAATCACTCAACAAAAGATTTCTGAGGGCGGTATTCCTCCTGAGCGAAATGATTTCAATGGAATGTTCAACCTAGTTACGCAACATTTAGTACATCTTAACAACGGCATGTCTTATGAGTTCGATCAAGAGCATGCAGATAAGATAGGCGGTTACCCATTAAATGCCCGTTTGATGCTTGATAATGGTGAGATTGTTCGCTCTACTGTACCTAATAATACAACCAATCCGAATGTCGATATGACGGGATGGGAGGTTAAACTACCTGCCGACTTGATTAAGGACTCTAGTGGAAAATCTCAACAAGAGGTAAATAATAGCCTTAAATTAAAGACTTTTGATGATCTAAAAAACTTTAAGCCAATAGTGAACGGTCAAACGGTTTATGTTGGGCAAAGAAGCAACACATATCTTCAAGGTGGCGGGTTTTTTTATGCTGATACATCTGATACCACTAGCTCAGATAATGATGGGACAATTCTAGTTGGTATTGATGGCACAAGATGGAAGAGAAAGTGGAATACTCACGCAGACCCTTGCTGGTTTGGAGCTGACTATACAGGGGCAGTAGATTGTTCTCCACAAGTCCAGAAGGCAGTAGATGTATCATATGGTCGTGTTTGGTTTGGTAATGCTGATCGAAATTTTAAAATGATGACCCCTGTTGGTTTACCAACTAACAGCATCGTTGGCGACATGTTGATGGAAATCTGCGGAGACGGTGCTAGGATTTGGGTTTACTCAAATACAGGAATTTTTACTTCAAAGAGATCAATAGGGTTAGAAACATCAACCGATGATCTATATACAGCAGCTCTTGAAATTGGGCGTGGTTTGAGATTTCAGGGAGATGGAACAAGTCAATCAGTCGTTGTTAATGGTGATCGTCTTTATAACGTTAATATGAAAGGTGGTCGATATTTGCGAATATCAGCACTAGTTAGAGCAACACAGCCACGAAGAAGTGAAACAACAGGATACGTTCAGTCTGTGACGATTGAAGGAAATCATCTAGCTCTTTGTAACCGAATCATTGATTCTAAGCGCGGATTTAATGTCACAGTTAGTCGAAACTTTGGTGAGTCGTGCTATGGCGGTGTTTATTTGGATGGTGACGGCAGTCCAGCTGTAAACGTTATCCGATGTGACGGAAACCTATGGGAATCTAGTGGGGTGTTTGCAAAGCTTGGAGCTGTTTACGCTGGTACATTTATTGGAAACTATTTTGAAGGGAATAATACTGGTGATTTACCTACACTTAAATGTCTTATTGAGTTAGGAAAAACTGGAACAACAGGGTATTCAAGTGGAGTAACATTTATTGGAAATCAATTTGGTGCTGCTGCTGCTTATAAGACAGATGTTAATTATGCTGATGTTAAGTTTACCGCATCATTAAGCGGAACTAATTTAGATGTGTTAGCACCACCAACTTTTATTGGTAACTGGACAAATGCATACAGGATGTGGTCAGAAGGTCAAGTAGTTACACAATTCGGTAACGCATTTAGCGGTGGTAATGCACGAAGACATCAAGCACCAAAACTACACACAGAAGCCAGAGTTACTTTTGATTTATCTCGAAAGGAATTTTTAAGCTCTACAAACTTAGTTGGTGGTGTTCACACAGTTGCAGAAATAGATACAAATTTAATATCGAATCTAGCAAGCCAATCATCTAGGGCTTGTACAGCCGATATGAATATATTCATGCAAATGAAGAATGCAAGTAACGTTGTTTTGGGCGCTGCGGTTGCTAAGGTTTCTCTAGTAGTGCAAGGTTCAGAGGGTATCGGTACTGGAGCAACAACAGATGTTTATGTTGCAGCATCTCTAACTGGATTCACTCAATTGGAAGGTGGAGTTATTGATACAGTTAACAATGTTAGCTTGTTCAAGCATTTTACATCACCAGTTTTAACAATTGAGCGAGTGGGTACAAAATACTTATTAAAATTGTCTGGCTATGTTGCGGCAAGTGGCTCAGTGTATGGTTCAACATCGAAAGTTTTCTCAAACACAACCATGACTATTTACTCGTTAAATAGCGGTGCTTCAGTAGCTGGTCAAATATATCCAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c5a4e3a16735c63e7a3e07efc04ca6e4c91ae397ea2b0695bc8aae3a733e5a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Acinetobacter Baumannii phage WCHABP12 Zhou,W., Feng,Y. and Zong,Z. 2013-06-24 — GenBank