Protein

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Genbank accession
XAN60317.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNELFSQGGKGSTGILTNKQAIARKFGVKQNEVVYFAVGVDLGGYKVIYDKTTQRAYSLPTSIDSGVTAVSLSPAGVLVHSAGNVDLGELAVTREEYVTLPGSFSTGVTVNVKNELVVFADGKYRWDGELPKIVSAGSTPESTGGVGLGKWVSVGDIVLRNQISNPNGASLYPALQIARWRDEGDIRGWGAKCNGVADDTAAIQSAITEANGSMIKLKLPRKSVVKIMGTILVPGGVSIDLNHAVIEGNGSQGVVGTNTIFESAYWDAGELKSNWSVPASSVGSIGLVPDMRIGGGRIRFAGSAYKMYQMIYGSAIKDTRITATRYPVIVKDSFYGTIEEISAMSPPAGADGSIAFQIESNIQAMGVRKCVASGFHTNWKITGLSSADCFDSCTAENGVRGVDIYGSDSGNIQNLELHNWYFEKNTIGIRVDPSAIVERLYIRNSYLHWQMIHLEASTVLSGGIDKSCNFKDGAHPSGTNWRGDFAVTGRSGEKTFIIEIEDYVSTIQNGSSIPGNYLVGQGVEIKRIETLTDSSGAVIARNLRQSSTAPKRYTGQTISTVLPSNSVPFCTVNTSDPARATITTQVVRSPYNIVHINLLVTDNGTPINACGTLFGSFGLMQPSGAKPMTITYDENNRMTIAIAGTNITNVQGIIQVV
Physico‐chemical
properties
protein length:657 AA
molecular weight: 70040,33240 Da
isoelectric point:6,72948
aromaticity:0,07610
hydropathy:-0,06560

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
DC_1953
STR
1–655
DC_1953
IPR040775
RBD
91–156
IPR040775 IPR011050
XAN60317.1
1 657
Architecture
ATT
STR
ATT 1-165 | STR 166-655 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAN60317.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,9924
Central domain 200 526 328 0,9865
C-terminal 527 657 130 0,9856
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-526
C-terminal
527-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LHE287
[NCBI] 		3144838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN60317.1 [NCBI]
Genbank nucleotide accession
PP761450.1 [NCBI]
CDS location
range 134994 -> 136967
strand -
CDS
ATGAACGAGTTATTCTCACAAGGTGGTAAAGGCTCCACTGGTATTCTTACCAACAAACAAGCCATTGCCCGTAAGTTTGGTGTCAAGCAAAATGAAGTAGTCTACTTTGCTGTGGGTGTGGACTTGGGTGGTTACAAAGTTATTTATGATAAGACTACCCAGCGTGCTTACTCATTACCAACCAGTATTGACTCAGGGGTTACTGCTGTAAGTCTCAGCCCTGCTGGGGTATTAGTTCACTCTGCTGGTAATGTGGACTTGGGTGAATTAGCTGTCACTCGTGAAGAGTATGTGACTTTACCTGGGTCATTCTCTACCGGAGTAACCGTTAATGTTAAGAATGAACTGGTTGTCTTTGCTGATGGTAAGTATCGCTGGGATGGTGAATTACCTAAAATCGTTTCTGCTGGCTCAACCCCAGAGAGTACTGGTGGCGTTGGTTTAGGTAAGTGGGTTAGTGTTGGAGATATTGTATTAAGAAATCAAATATCAAATCCTAATGGTGCATCTCTATACCCAGCACTACAGATTGCAAGATGGCGAGATGAAGGTGACATCAGAGGATGGGGTGCTAAATGCAATGGTGTTGCTGATGACACTGCCGCAATACAAAGTGCAATAACAGAAGCAAACGGCTCGATGATCAAGTTAAAGCTGCCTAGAAAATCTGTAGTTAAAATAATGGGGACAATTCTGGTTCCAGGTGGAGTTTCAATAGATTTAAACCACGCAGTCATAGAAGGGAATGGTAGCCAAGGCGTAGTTGGCACAAACACTATTTTTGAGTCAGCTTATTGGGATGCAGGGGAACTTAAATCAAACTGGTCAGTTCCTGCTAGTTCAGTTGGCTCAATTGGCCTTGTTCCTGATATGCGTATTGGTGGTGGGCGCATCAGATTTGCCGGTTCTGCTTACAAGATGTACCAGATGATTTATGGGAGTGCAATCAAGGACACTCGCATCACTGCGACGCGTTACCCAGTTATAGTTAAAGACAGCTTCTATGGAACCATTGAGGAAATCTCCGCAATGAGTCCTCCGGCAGGCGCTGATGGGTCTATAGCATTCCAGATTGAATCAAATATCCAGGCAATGGGCGTTCGTAAATGCGTAGCGTCTGGTTTCCATACTAACTGGAAGATAACCGGTCTTAGCTCAGCAGATTGTTTTGATTCTTGCACAGCTGAAAATGGTGTCCGTGGTGTGGATATTTATGGTTCTGATTCAGGAAATATTCAAAACCTTGAATTACATAACTGGTACTTTGAGAAAAACACAATAGGGATACGAGTTGATCCTTCAGCAATAGTTGAAAGGCTTTATATCAGAAATTCATATTTACATTGGCAAATGATTCATCTGGAAGCGTCAACTGTTTTATCAGGTGGGATTGATAAATCATGCAACTTTAAGGATGGAGCACATCCATCAGGAACTAACTGGCGTGGTGATTTTGCAGTCACTGGTCGTAGTGGTGAGAAGACATTCATCATTGAGATTGAGGATTACGTAAGCACCATTCAGAATGGCAGTTCGATACCTGGTAACTATCTCGTTGGACAAGGAGTGGAGATTAAGCGCATTGAAACACTCACGGATTCATCAGGGGCTGTTATTGCGCGAAATTTACGCCAAAGCAGTACAGCCCCTAAGAGATATACGGGGCAAACTATTAGCACAGTACTGCCAAGTAATAGCGTTCCGTTCTGTACTGTCAACACCAGCGACCCGGCAAGAGCCACCATTACCACTCAGGTGGTACGTAGCCCATATAATATAGTTCACATTAACCTGCTGGTTACTGATAATGGAACTCCAATAAATGCATGTGGTACGTTATTTGGTAGCTTTGGTCTAATGCAACCATCTGGCGCTAAACCCATGACTATCACATATGATGAGAACAACAGGATGACTATTGCCATTGCTGGCACAAACATCACTAATGTGCAAGGAATAATTCAGGTTGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d779f001f402d970c0829f35b8de86ba6fd5536b6f909a1703f8829d43cc64e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Escherichia coli phage LHE287 Xu,S. 2017-10-19 — GenBank