Protein

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Genbank accession
YP_001285789.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPTSNKIVTVSGTGYTVDVTVCNLDADLTLKDFVVLHDGVLVSNANYTKTTRTILTYTGTALPSTTVEVRRRTPTNYILGARYGSRIRSDDWNKELDRITRRAEEYELNGVGAGSITGSQAPQNDPFGASWASDIVYPPTRQAVYSWGVNLVNATQLSSTLSSYVTNTALSTLLTNYALSASPSFTGNPTVPTQLTTDSSTRIANTAFVQNLIAGLNLPTTYAPLSSPTFTGTPSAPTPAAGNSTTRLATTAFVSQSQRPFVDATRNTTPQALAHNTYTTLVWNNEIRDSDGAYNSTTGAFTVPAGLGGYYEFTGAVLLSAGCSNLLVEIYVNGIPARRIGQSQGGSDVLFGTPFTGSVLLGAGDVVTLRCYQFNSSSASRDTLVTSSAFNWVTIKRLNV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 42552,81260 Da
isoelectric point:7,65737
aromaticity:0,08750
hydropathy:-0,10775

Domains

Domains [InterPro]
DC_0465
STR
1–221
DC_0465 DC_2167
Coil
Unmapped
89–109
Coil IPR001073
IPR008983
RBD
254–396
IPR008983
IPR008983
RBD
274–396
IPR008983
YP_001285789.1
1 400
Architecture
STR
RBD
STR 1-221 | RBD 226-399 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Phormidium phage Pf-WMP3
[NCBI] 		2914005 Uroviricota > Caudoviricetes > Saffermanviridae > Wumptrevirus WMP3 >
Host Leptolyngbya foveolarum
[NCBI] 		47253 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001285789.1 [NCBI]
Genbank nucleotide accession
NC_009551.1 [NCBI]
CDS location
range 16425 -> 17627
strand -
CDS
ATGCCAACGAGTAACAAGATAGTTACCGTCAGTGGTACAGGTTACACAGTAGACGTGACAGTGTGTAACCTAGACGCTGACTTAACACTAAAAGACTTTGTAGTACTTCATGACGGAGTACTCGTAAGTAACGCTAACTATACTAAGACGACTAGAACCATCTTGACCTATACGGGTACAGCGTTACCTTCTACGACTGTAGAAGTTAGACGAAGAACACCAACCAACTATATCCTTGGTGCAAGATATGGTAGTCGTATCCGTAGTGATGACTGGAACAAAGAGCTAGACCGTATCACTAGACGTGCTGAAGAGTACGAGCTTAACGGTGTAGGGGCTGGTAGTATCACTGGTAGCCAAGCACCACAGAACGACCCCTTTGGTGCGTCATGGGCTAGTGATATCGTTTACCCTCCGACAAGACAAGCTGTGTACAGTTGGGGTGTGAACCTCGTTAACGCAACACAGTTATCTTCTACGTTGTCGTCATACGTGACAAACACAGCACTGTCTACGCTGTTAACTAACTATGCGTTATCTGCTTCCCCTTCCTTTACGGGGAACCCAACAGTACCTACACAGTTAACGACAGACAGTAGTACACGTATCGCTAACACAGCGTTTGTTCAGAACCTTATCGCAGGGTTAAACTTACCGACAACGTATGCACCACTGTCTAGCCCTACGTTCACAGGTACACCATCTGCACCTACACCTGCTGCTGGTAACTCTACAACTAGGTTAGCTACTACAGCCTTTGTGTCTCAAAGCCAAAGACCGTTTGTAGACGCTACACGTAACACGACACCACAGGCGCTTGCTCATAACACATACACTACGCTTGTATGGAACAACGAGATCAGGGACTCTGACGGTGCGTATAACTCGACTACAGGTGCGTTTACTGTACCTGCTGGTTTGGGTGGTTACTATGAGTTCACTGGTGCTGTGTTGTTAAGTGCTGGCTGTAGCAACCTTCTCGTAGAGATCTATGTGAACGGTATACCAGCTAGACGTATAGGACAAAGCCAAGGAGGTAGTGATGTCTTGTTCGGTACACCCTTCACTGGTAGTGTGTTGCTAGGTGCTGGTGATGTGGTGACACTGAGATGCTACCAGTTCAACAGTTCATCAGCGTCTCGTGATACGTTAGTCACAAGCAGTGCGTTTAACTGGGTGACTATCAAACGCCTGAACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4edb08535e8ae58f0400a0e3ba3fe7ffe63ca4fa66e7bb0e57d8df4db97cf410
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50