Protein

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Genbank accession
YP_009625564.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSVQIAVSDGTLTRIALSIEYFEKDDITLYRNLELTPLVLGTDWQWDGDTHINLLTGIPVPVGSYITVRRNTDIDRAFNIYDGGAAFNRETLDENFKQMIYLAQEFTEGNGLTGLYFPLDMHGFQIKNLGEPTDPGDAVTKQYVDTANTAQNANFNASQQAQDQAVAASQAVQDNRLASLENTFVQATSSYPWYTVSTSTTDTFTPGFNFTKAAVYINGVCQTPDYSYIVVANQILLADPVPLGTMVFARLGEDIQNDDDFATTAQLSAVQANLQDEIDVTNTEVSDKASKGANSDISSLSGLTTPLSAAQGGTGNNTGNAATATVLATPRTIQTNLASTSAASFNGSANITPGVTGNLPVTNGGTGAGSAPSARANLGAAMNGINNDISNLAALTGGITGLTTGTAAASGIVGEVASAASSSATNLVSGSVINIISLSLPAGDWELESAFQIINTGNVTALAFGVSTTTGVLPTPWYDVYSITTTIGSGTSNRQGMARRVLLSTTTTVYLVAQATFTGTATANGYVRARRVR
Physico‐chemical
properties
protein length:534 AA
molecular weight: 55827,01080 Da
isoelectric point:4,32803
aromaticity:0,07491
hydropathy:-0,04457

Domains

Domains [InterPro]
DC_1894
ATT
1–192
DC_1894
IPR005604
ATT
3–108
IPR005604 DC_1547
YP_009625564.1
1 534
Architecture
ATT
STR
ATT 1-192 | STR 193-534
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PatP_CB5
[NCBI] 		1983582 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009625564.1 [NCBI]
Genbank nucleotide accession
NC_042131.1 [NCBI]
CDS location
range 37275 -> 38879
strand +
CDS
ATGTACTCAGTCCAGATTGCCGTATCAGACGGTACTCTAACTCGAATTGCACTGAGCATCGAGTACTTTGAGAAAGATGATATCACGCTGTACCGTAATCTGGAACTGACCCCACTTGTACTGGGTACTGATTGGCAATGGGATGGGGATACCCACATCAACTTGCTGACTGGTATCCCAGTACCAGTAGGTAGCTACATTACTGTACGCCGTAATACAGATATTGACCGTGCCTTTAATATTTATGACGGGGGTGCGGCGTTTAACCGAGAAACCCTTGATGAGAACTTCAAGCAGATGATTTACCTTGCGCAGGAGTTCACTGAGGGTAATGGACTTACCGGCCTGTACTTCCCATTGGATATGCACGGTTTTCAGATTAAGAACTTGGGGGAACCTACCGACCCTGGGGATGCGGTTACTAAACAGTACGTAGATACTGCTAATACTGCACAGAATGCTAACTTTAATGCTAGTCAACAGGCGCAGGACCAAGCAGTAGCCGCATCGCAGGCTGTACAAGATAATCGGTTAGCCTCCCTTGAGAATACTTTCGTTCAGGCCACTTCTAGTTATCCGTGGTACACAGTGAGCACTAGTACGACGGACACGTTCACACCCGGCTTTAACTTCACCAAGGCAGCAGTGTACATCAACGGAGTATGCCAGACACCGGACTACAGTTACATCGTAGTGGCTAATCAGATACTCCTTGCAGACCCCGTGCCACTAGGCACGATGGTCTTTGCCCGGCTAGGGGAAGACATTCAGAACGATGATGATTTTGCCACTACTGCACAGCTTAGTGCGGTACAGGCAAACCTACAGGATGAGATTGATGTCACTAACACAGAGGTTAGTGACAAGGCTAGTAAGGGTGCAAACTCCGATATTAGCAGCCTGTCTGGTTTAACCACGCCACTTAGTGCTGCACAGGGTGGAACGGGGAACAACACGGGGAATGCTGCGACAGCAACTGTACTTGCTACCCCCCGAACAATCCAGACTAACCTAGCCAGCACTAGCGCTGCGAGTTTTAATGGTTCAGCTAACATTACACCGGGCGTAACTGGAAATCTCCCAGTTACTAATGGGGGTACCGGGGCTGGCTCCGCACCTAGCGCACGTGCTAACCTCGGCGCAGCTATGAATGGTATCAACAACGATATCTCAAACCTAGCTGCCCTGACAGGGGGTATTACTGGGTTAACTACAGGCACGGCGGCAGCCTCTGGTATTGTTGGAGAGGTGGCTTCCGCTGCGTCTAGTTCTGCTACTAACCTTGTATCTGGTAGCGTTATTAATATTATCAGCCTTAGTTTACCTGCGGGCGATTGGGAACTGGAAAGTGCTTTCCAAATCATAAACACAGGTAATGTGACCGCCCTAGCCTTTGGTGTCAGCACCACCACAGGGGTGTTACCTACTCCGTGGTATGACGTGTACAGCATCACCACTACGATTGGTTCAGGGACTTCGAACAGGCAGGGTATGGCAAGACGAGTACTACTAAGCACCACCACCACTGTGTACCTTGTAGCACAGGCGACCTTTACAGGCACAGCTACCGCTAATGGGTACGTACGCGCGAGGCGAGTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ec8a80aecda9c9fdfb7929cff21afcd088222d95a14376393861dd8cd83d048
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7671
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50