Protein

View in Explore
Genbank accession
URC25655.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATVTVIPSDITNLKNDVSTLKQDVATIPGDITKLKSDVSTLKQDVAGKASTTDVDNKLKLYLKQNDLSSELGSGRYGGSFYPLTGNEKFYLFRLSTTAQSANLWLDPNAGVSQVLRSTSSSRYKSSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPE
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19262,34350 Da
isoelectric point:4,87215
aromaticity:0,08621
hydropathy:-0,40115

Domains

Domains [InterPro]
DC_2250
STR
1–162
DC_2250
G3DSA:1.20.5.170
STR
3–49
G3DSA:1.20.5.170 IPR030392
URC25655.1
1 174
Architecture
STR
CHP
STR 1-162 | CHP 163-174
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC195
[NCBI] 		2936946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URC25655.1 [NCBI]
Genbank nucleotide accession
ON185588.1 [NCBI]
CDS location
range 24472 -> 24996
strand -
CDS
ATGGCTACAGTCACTGTTATACCTAGTGATATAACGAATCTGAAAAATGACGTTTCAACACTAAAACAGGATGTTGCTACTATTCCTGGTGATATAACGAAGCTGAAAAGTGATGTTTCGACACTAAAACAGGATGTTGCAGGAAAAGCATCAACTACTGATGTTGACAATAAGTTGAAGTTGTATCTAAAACAAAATGATCTATCGTCCGAGTTGGGTAGCGGAAGGTATGGTGGCAGTTTTTACCCCCTGACTGGTAACGAGAAATTTTATTTGTTTAGACTAAGCACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTGTCGCAAGTTTTACGCTCCACTTCCTCTTCTCGTTATAAGAGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTTTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
660fd05bbf1facd90f44d50ba750569df293202f38c40a7e4ce6478990f12901
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7576
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank