Protein

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Genbank accession
YP_009044948.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVYNKHEWQDGELITSGKLNHMELGIQLADKQVSVKDYGAVGDGVADDTKSFINAFSENKGTKVIIPTGTYLITKQVSIFGDVEFQNAKVISTNNSQDYMFNVDGLDEINIIGFKYNNDNGRGAIKISNTKTVRLTSFDISGYSAETAYHKTDSALMLDNNTTIYLDDIKVHDHGFQYGAELEHLNRCISIQGDKTKTVIARGLQFSKANQGLVLSTPNGNVIVSDSSIDNTTDNSMYLLACLTFMATNVRFDDYYDESVIMGSGDYSFTNCWFSNVPNKVFGINNDTVGLSIIGCNIIQSDKHSGQIVSFRDVNYTLNTFIFESNRIVTAPDSTNNDLFYLGQINLFSIKNNTIKTFSISDGRNMFAFRNSDSNTPYAGVIKDNYVMPITKDVVIGTYYFARLYKEVGKVEISDNYISNGRMPMDNASVIYNGQKFFTSLGYVIDRTTRQSLYATTIPTKGRFNIGDVVYNTDPSNGVFAWVRVTTGLNNVSGVDWKTVSVN
Physico‐chemical
properties
protein length:503 AA
molecular weight: 55952,92290 Da
isoelectric point:5,25496
aromaticity:0,11133
hydropathy:-0,25567

Domains

Domains [InterPro]
DC_2249
ATT
4–171
DC_2249 DC_2129
IPR012334
STR
26–439
IPR012334
IPR011050
STR
28–290
IPR011050
IPR024535
ENZ
33–233
IPR024535
YP_009044948.1
1 503
Architecture
ATT
STR
ATT 4-171 | STR 172-503
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009044948.1
1 503
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9764
Central domain 50 430 382 0,9895
C-terminal 431 503 72 0,9363
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-430
C-terminal
431-503

Taxonomy

  Name Taxonomy ID Lineage
Phage Leuconostoc phage phiLNTR2
[NCBI] 		1262523 No lineage information
Host Leuconostoc mesenteroides
[NCBI] 		1245 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009044948.1 [NCBI]
Genbank nucleotide accession
NC_024389.1 [NCBI]
CDS location
range 24971 -> 26482
strand -
CDS
ATGGTTTATAATAAACACGAGTGGCAAGATGGTGAATTGATAACTTCTGGTAAGTTAAACCACATGGAACTTGGAATACAATTAGCGGATAAACAAGTTTCGGTTAAGGATTACGGTGCAGTTGGAGATGGCGTTGCCGATGACACAAAGTCTTTTATTAATGCTTTCTCAGAAAATAAAGGAACTAAGGTGATTATTCCTACTGGTACGTATCTAATAACTAAGCAAGTATCTATATTTGGAGATGTCGAATTTCAAAATGCAAAAGTTATAAGCACTAACAATTCACAGGATTACATGTTTAATGTTGATGGTTTAGATGAGATTAATATTATTGGGTTCAAGTATAATAATGATAATGGTAGGGGTGCTATTAAAATATCTAATACTAAAACAGTTAGATTGACAAGTTTTGATATTTCAGGGTATTCAGCAGAGACGGCTTATCATAAAACAGATAGCGCACTAATGCTGGATAATAACACAACTATTTATTTAGATGATATCAAAGTTCATGATCATGGTTTCCAATATGGAGCAGAGTTAGAACATTTGAACCGTTGTATATCTATTCAAGGAGATAAAACAAAAACTGTAATTGCTAGAGGACTTCAATTTAGTAAGGCAAATCAAGGTTTAGTATTATCAACACCAAATGGAAATGTTATTGTTTCTGATAGTTCAATTGATAACACTACGGATAACTCGATGTATTTACTAGCATGTTTAACTTTCATGGCTACTAATGTACGTTTTGATGATTATTATGACGAAAGTGTAATAATGGGTAGTGGGGATTATAGTTTTACAAATTGTTGGTTCTCAAATGTTCCCAACAAGGTGTTTGGTATAAATAATGATACTGTTGGATTGTCTATTATTGGTTGTAATATAATTCAAAGTGATAAGCATTCTGGTCAAATAGTTAGCTTTAGAGATGTAAACTATACGCTTAACACTTTTATTTTTGAAAGTAATAGAATAGTAACCGCACCAGATAGCACAAATAACGATCTATTCTACTTGGGTCAAATCAACTTGTTTTCAATAAAAAATAATACAATAAAGACGTTTAGCATATCAGACGGTAGGAACATGTTTGCGTTTAGAAATTCAGACAGTAATACACCATATGCTGGAGTTATAAAAGATAATTATGTAATGCCAATAACTAAAGACGTAGTTATTGGAACGTATTATTTTGCAAGATTGTACAAAGAGGTTGGAAAAGTCGAAATTTCAGATAATTACATATCAAACGGTAGAATGCCTATGGATAATGCTTCGGTAATATATAACGGACAAAAATTCTTTACTAGTTTAGGTTATGTTATCGATAGAACAACAAGACAATCATTATATGCCACAACCATTCCCACTAAAGGACGGTTTAACATTGGTGATGTTGTTTATAATACTGATCCATCAAACGGTGTATTTGCTTGGGTTAGAGTGACAACAGGATTAAATAATGTTTCTGGTGTTGATTGGAAAACAGTTAGTGTTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3770a17201e1590c7c1cbe36b260ddbd77aeb8ea7d904547a6d940762668e23e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50