Protein

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Genbank accession
YP_009273246.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MADPVSENGTPWNQLPGATGGIRRNMTKRPTGTTGGNFFLDMVMGLIRAVFGNFIPGESGVPGMPPGTNPLSFLSDLMGMRWEQLDTVTDGQLELNDRTDLLSPLLDYGSCFANGSGEISQIGRVPFNQKVGPMTGCRLESNGIVLEDQGLWQINARLAFSYTIGGGAQTWRIRVYRPNGTLFSEQLDYSSESNENTREMLTTVVVPDAGYRVEVWITALIIGRATIGGPQNNRLTVQHISRSTNFPI
Physico‐chemical
properties
protein length:248 AA
molecular weight: 27060,28160 Da
isoelectric point:5,09894
aromaticity:0,08065
hydropathy:-0,24315

Domains

Domains [InterPro]
DC_0513
STR
1–229
DC_0513
YP_009273246.1
1 248
Architecture
STR
STR 1-229 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA1
[NCBI] 		1647470 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009273246.1 [NCBI]
Genbank nucleotide accession
NC_030902 [NCBI]
CDS location
range 19617 -> 20363
strand +
CDS
ATGGCCGACCCGGTATCCGAGAACGGAACACCGTGGAATCAGCTTCCGGGCGCGACGGGCGGCATCCGCCGCAACATGACCAAGCGGCCGACAGGCACCACGGGCGGGAACTTCTTCCTCGACATGGTGATGGGGCTCATCCGCGCCGTCTTCGGAAACTTCATCCCCGGAGAGTCCGGCGTGCCAGGCATGCCGCCGGGAACCAACCCACTCTCCTTCCTGTCCGACCTGATGGGCATGCGGTGGGAGCAGCTCGACACCGTCACCGACGGACAGCTCGAACTCAACGACCGCACCGACTTGCTATCGCCGCTGCTCGACTACGGCTCGTGCTTCGCGAACGGGTCCGGTGAGATCAGCCAGATTGGACGGGTGCCGTTCAACCAGAAGGTCGGACCGATGACCGGCTGCCGCTTGGAGTCGAACGGCATCGTGCTGGAGGACCAGGGCCTGTGGCAGATCAACGCCCGACTGGCTTTCTCCTACACGATCGGCGGTGGCGCGCAGACGTGGCGCATCCGCGTGTACCGGCCGAATGGGACGCTCTTCTCGGAGCAACTCGACTACAGCTCCGAGTCGAACGAGAACACGCGCGAAATGCTGACGACGGTGGTGGTCCCGGACGCCGGATACCGCGTTGAGGTGTGGATCACGGCACTGATCATTGGCCGCGCGACGATCGGCGGCCCGCAGAACAACCGGCTGACGGTGCAGCATATTTCACGCTCGACTAACTTCCCAATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d45f3a4ea45a01fa5c7a55326626abb070efb7a23d35b92cf77ca20b0cfd95bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Locating and activating molecular 'time bombs': can Mycolata prophages be selectively induced en masse to biologically control activated sludge foaming? Dyson,Z.A., Brown,T.L., Farrar,B., Doyle,S., Tucci,J., Seviour,R.J. and Petrovski,S. 2016-08-03 — GenBank