Protein

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Genbank accession
YP_009807866.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MARRILPHTTSDALVNALLAVGEVVVNDTTGRVHIGDGATLGGLVVGADLSEAAGDEAAARVFTDLGDPTKGTSLVSFLLAGASARAVALAERLSQTIYLWDWLSDAQRASIKSGAPTAIGVEAQRAINFCQGKLANPGGAVGGYELVLPSGRLLIDQPLVYDVRKTSDIKDDADTRRLTIRGAGSALTLLYYNGDPSKPFLTVEGNNSGNGHDLYFLAQGFRLRRDFSGRGQGIGMRLFNVADVDLRDVHVDGWNVGMDIEGVLGFTAYNLFVLGNNGGLNARLGSGFTRPNLFQFIGGKFSGNSVFAAQITAGANISFIGTRFEGNGAGNNVDGEPNKDNQFVVTLINAPEEGGSWADFFNCYFENNNVTAEVSFTSSTSMNAVASFRSCTFQRVSNTRNPVFHTDMYMGGTGRLKLLFDSVAWRSLNGRTPNPAFHSWRNQSPTRVEVTMINCFLEVPVEGPDTGGAVVQGMRKVVLDVAVAADGSWNSDPLQSPNVKQVNHTAGTGKYTILWNYPPEVLANLRVIPRLDGSVGYAAKTFVGGSGIDITTYNTAGAVTDLSFTVEAYEQRV
Physico‐chemical
properties
protein length:574 AA
molecular weight: 61252,91660 Da
isoelectric point:5,50795
aromaticity:0,09059
hydropathy:-0,07718

Domains

Domains [InterPro]
DC_0435
ATT
1–45
DC_0435 IPR011050
YP_009807866.1
1 574
Architecture
ATT
STR
ATT 1-45 | STR 124-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009807866.1
1 574
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,9894
Central domain 121 462 343 0,9905
C-terminal 463 574 111 0,9642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-462
C-terminal
463-574

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphingomonas phage Scott
[NCBI] 		2282912 Uroviricota > Caudoviricetes > Autographivirales > Scottvirus > Scottvirus scott
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009807866.1 [NCBI]
Genbank nucleotide accession
NC_048029 [NCBI]
CDS location
range 12551 -> 14275
strand -
CDS
ATGGCTCGTCGTATTCTCCCTCACACCACCAGCGATGCGCTTGTAAACGCTCTGCTTGCGGTTGGCGAGGTTGTTGTCAATGATACTACAGGTCGCGTTCATATTGGTGACGGGGCTACCCTTGGCGGGCTAGTCGTTGGTGCAGACCTCTCTGAGGCAGCGGGTGACGAGGCAGCAGCAAGGGTCTTTACGGACCTCGGCGATCCGACCAAGGGCACCAGCCTTGTAAGTTTCCTACTTGCAGGGGCAAGCGCGCGGGCGGTGGCTCTGGCTGAGCGCTTGAGCCAGACTATCTACCTTTGGGACTGGTTGAGCGATGCTCAGCGTGCTTCGATTAAATCCGGTGCGCCTACCGCTATCGGTGTTGAAGCTCAGCGAGCTATCAACTTTTGTCAGGGTAAACTCGCAAATCCCGGTGGTGCGGTAGGTGGGTACGAACTGGTGCTACCTTCGGGCAGGCTCCTTATCGACCAGCCTCTTGTGTACGACGTTCGTAAAACTAGTGACATTAAGGACGACGCGGATACTCGGCGTTTGACCATCCGGGGTGCAGGCTCTGCACTTACGCTGCTGTATTACAACGGTGATCCCAGCAAGCCGTTCCTAACCGTAGAAGGAAATAACTCCGGTAACGGACACGACCTGTACTTCTTGGCGCAGGGCTTCCGCCTTCGTCGGGACTTTAGTGGTCGCGGTCAAGGTATTGGTATGCGCTTGTTCAACGTCGCTGATGTTGATCTTCGCGACGTTCATGTTGACGGCTGGAACGTAGGCATGGATATCGAAGGAGTGCTGGGCTTTACCGCCTACAATTTGTTTGTTCTGGGCAACAACGGCGGGCTTAATGCTCGTCTGGGTAGCGGGTTTACTCGTCCTAATCTCTTTCAGTTCATCGGCGGCAAGTTTAGCGGTAATAGCGTCTTCGCTGCCCAGATTACTGCCGGAGCAAACATCAGCTTCATTGGTACTCGCTTCGAGGGCAACGGAGCAGGCAATAACGTTGACGGGGAGCCTAACAAAGATAATCAGTTTGTTGTAACCCTGATTAACGCTCCCGAAGAAGGTGGTTCTTGGGCAGACTTCTTCAACTGCTATTTTGAGAACAACAACGTAACGGCAGAGGTTTCGTTCACTAGCAGCACTTCTATGAACGCGGTCGCTTCGTTCCGGTCTTGTACTTTCCAGCGGGTGTCCAATACTCGCAACCCCGTCTTCCATACTGATATGTATATGGGAGGGACTGGGCGGCTAAAGCTGTTGTTCGATAGCGTTGCGTGGCGCAGCCTTAATGGCCGTACGCCTAACCCTGCTTTCCATTCATGGCGGAACCAAAGCCCTACTAGGGTTGAAGTAACCATGATTAATTGCTTCCTTGAAGTTCCTGTCGAAGGGCCGGATACGGGTGGGGCAGTTGTGCAGGGTATGCGTAAGGTAGTACTTGACGTAGCCGTGGCTGCTGATGGTAGCTGGAATAGCGATCCTCTACAGTCGCCCAATGTCAAGCAGGTTAATCACACTGCTGGTACGGGCAAGTATACGATCTTGTGGAACTATCCTCCAGAAGTTCTTGCTAACCTGAGAGTAATTCCCAGGTTGGATGGCTCGGTAGGATATGCTGCTAAGACGTTCGTTGGTGGTTCTGGGATCGATATTACCACCTATAACACCGCAGGCGCTGTGACTGACCTTAGCTTTACTGTTGAGGCTTACGAGCAGCGCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7350a26fdda2d1d85449be65ac9090673c981ac3894d884110a76198a7277bd9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Relating species composition and interactions to biofilm formation in a model drinking water community Thompson,A., English,E.L., Willsey,G., Nock,A.M., Eckstrom,K., Tighe,S.W., Bavelock,M., Cairns,B., Foote,A., Schulman,H., Gupta,S., Kadouri,D. and Wargo,M.J. 2020-01-01 — GenBank