Protein

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Genbank accession
AGO49349.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MRTIKNLALPQDSDYVNFPDGRVRNETVTAAGTPVVEEVYGDLLQNFYKIIRSSGLEITETADSEGTQFQLLDALKIFANEVNDLKQTLTVNQGEISTLLNLDTLPDDYVFIGKITEDISANNIYLLNGTGEVLVNAVSTSDVKASSLVLVVLSQVGYSSITDLTVAAEDLKSLSVSLGTPLSFNSTKNLMYFSDGKIITDYPKVYDVQQAINDSLMTSDFVAIDCFTVKEKLLCYAFNKTNSTYHLFSFLASNPGALEGEVTFIKSVNAAENKPLIYTNGQFLFITNTENEFGDIASHNKIGKYLFDEVALEITLDTSLTIESSFFKSTNCFINEAGSDIYSMLLGQLNKYSLENNTVEDLGNFQSNNGQVFRFNKQTYFYNGSNAAKWNY
Physico‐chemical
properties
protein length:392 AA
molecular weight: 43411,06480 Da
isoelectric point:4,39805
aromaticity:0,10969
hydropathy:-0,09719

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGO49349.1
1 392
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9773
Central domain 177 375 200 0,0775
C-terminal 376 392 16 0,9799
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-375
C-terminal
376-392

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi3:1
[NCBI] 		756279 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGO49349.1 [NCBI]
Genbank nucleotide accession
KC821630 [NCBI]
CDS location
range 25173 -> 26351
strand +
CDS
ATGAGAACGATAAAAAATTTAGCATTACCTCAAGATTCTGATTATGTTAATTTTCCTGATGGAAGAGTTAGAAACGAAACTGTCACCGCAGCGGGAACTCCTGTAGTTGAAGAGGTTTACGGTGATCTACTTCAAAACTTCTACAAGATTATAAGAAGCTCAGGTCTTGAAATTACTGAAACAGCTGACAGCGAAGGAACTCAGTTTCAATTACTTGACGCTTTAAAGATTTTTGCTAACGAAGTTAATGACCTGAAGCAAACTCTTACAGTTAATCAAGGTGAAATTTCTACGCTATTAAATCTAGATACTCTTCCTGATGATTACGTGTTCATAGGTAAAATAACTGAAGATATTTCAGCTAACAACATCTACTTGTTGAACGGTACTGGTGAGGTTTTGGTAAATGCTGTATCTACTAGCGATGTAAAAGCTTCTAGTCTTGTATTAGTTGTATTAAGTCAAGTAGGGTATTCAAGTATAACTGATTTAACCGTAGCAGCTGAAGATTTGAAGAGTTTGAGTGTGTCATTAGGAACGCCTTTATCATTCAACAGCACTAAGAATTTGATGTATTTTTCCGACGGTAAAATTATAACTGATTACCCTAAGGTGTATGACGTACAACAAGCAATCAACGACAGCTTAATGACGAGCGATTTTGTCGCTATTGATTGTTTCACTGTAAAAGAAAAATTATTGTGCTATGCATTTAATAAAACCAACTCAACTTATCATTTATTCTCTTTCTTAGCTAGCAACCCTGGAGCTCTTGAAGGAGAAGTCACTTTTATTAAAAGCGTTAACGCTGCTGAAAATAAACCACTAATCTATACGAATGGTCAATTCTTATTCATAACTAATACTGAAAATGAATTTGGTGACATTGCTAGTCACAATAAAATTGGTAAATATTTGTTTGACGAAGTTGCTTTAGAGATTACTCTTGACACTAGTTTGACAATAGAAAGCTCTTTTTTCAAGAGTACGAATTGCTTCATAAACGAAGCTGGTTCTGATATTTATTCTATGTTATTAGGACAGTTGAATAAATACAGCTTAGAAAATAATACCGTAGAAGATTTAGGTAACTTTCAATCAAATAACGGACAGGTATTTAGATTCAATAAACAAACTTATTTCTATAACGGCAGCAATGCAGCTAAATGGAATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47c096e22ad05a63a63b897f1ae5eabb4cc8dd6ccfa1ea3b02884c6817f558d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5745
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50