Protein

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Genbank accession
BDR26742.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MIQFKFGEYRTRVPFQGARDRRDINDRNDYVDGGIAIQDPSQGLLYQEWHAELLEDGIYLTPEKDRVTTRIGPGINEGVASMAVTFDQNMNYIVVYSKQGEGFIDFFDSATEERNVMNIGPVDYIKADLDDRRPEGSAWAQVLVCYTRQGNFYIRASSTRFTEEELIIGTGKVTRPIVKCGMAANWRFQVLFRGRM
Physico‐chemical
properties
protein length:196 AA
molecular weight: 22473,06650 Da
isoelectric point:5,17186
aromaticity:0,11735
hydropathy:-0,45357

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LP
[NCBI] 		2972145 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26742.1 [NCBI]
Genbank nucleotide accession
LC727700.1 [NCBI]
CDS location
range 33117 -> 33707
strand +
CDS
ATGATACAGTTCAAGTTCGGTGAGTACCGCACCCGTGTGCCCTTCCAGGGTGCGCGGGACCGGCGGGACATCAACGACCGTAACGACTACGTGGATGGCGGTATCGCCATCCAAGATCCTAGTCAAGGTCTGTTGTACCAGGAGTGGCACGCCGAGCTGCTCGAAGACGGTATCTACCTGACGCCTGAAAAAGATCGAGTAACTACCCGCATCGGTCCAGGCATCAACGAAGGCGTGGCTAGCATGGCGGTCACGTTTGACCAGAACATGAACTATATCGTGGTGTATTCCAAGCAGGGCGAGGGCTTCATCGACTTCTTCGACTCAGCTACCGAAGAGCGCAATGTGATGAACATTGGGCCGGTGGACTACATCAAAGCAGACCTGGACGACCGGCGGCCCGAGGGCAGCGCCTGGGCACAGGTGCTGGTCTGCTACACGCGGCAGGGTAACTTCTACATCCGGGCCAGCTCTACTCGCTTCACCGAGGAGGAGCTTATCATCGGCACCGGTAAGGTGACCCGGCCTATCGTCAAATGCGGAATGGCAGCGAACTGGAGATTCCAGGTCCTGTTCCGAGGGAGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f66252cc96f47ecf0f990ea28cbf32312a5304f8e9a800786335ca9f740cc71
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6377
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LP Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank