Protein

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Genbank accession
ADJ53238.1 [GenBank]
Protein name
gp49
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADFKTNVPLWGNKGTKPSDGLLKGGYAPNDRPSAQNTNFMYNAFSNAIKEVQDNVPLEANILNKTGDVIEGTILSAPKQLKYSINKGKAKVQGNVNHFSDVSGNSKITITIPKDVVIPGRQTLVFSFLHSFKGEVISLDFSSTYVSDFATTNTDNIKNDEYRKVRLSFTLGENAHNADIVIVMSARERNLFSCTIAEDFVTSGLIGVPYSLKADSLIALDEGAMLPKETLPKLDCNVIRTPYIGYTTNAVNAPQGEKLGTLMVFVTAETSKLTQVFTGNTSGKVYYRMMNIANTFSSWAEVLTGSALADALTNYTTKEDLKKATAGMLTEESATNWQKFKVTQDNGSRVRLTEGTDLLTLATGYYEVAQCKNSPLPETEASWKNVDVVEGISGRKMLRLTVSGGGATFYKTLHTNGNGGRDWWQVADAGVTQNNRVTEDNGRFYYNLTDNKSDILASVASESGFKTGYAHLTVLNGLGNNRSFRFTSYYYPTNGYIHAVDTAGQSHIRVCNGGVWGDWKSIADTSVTQNFKITNDDGSAITVKNYDLLNTTDASNFDGYSNTAINMPAGVHKSGYIKRKIREGFIEVTYSPYNRNTVYRNSYNPETKVWAGWEKLATASEVSDITPVLLWEGSANGAGTKTYPLKQDVMKFSKIKITHYSAVFKNAVSEYAVPAKIGDFWNCILSPNTNLTDARGDHPTIYEVAIRFNNTSFMIERDSMYEFATSKPTLNANQAYITKIEGVRK
Physico‐chemical
properties
protein length:745 AA
molecular weight: 82064,09580 Da
isoelectric point:8,22393
aromaticity:0,10201
hydropathy:-0,37678

Domains

Domains [InterPro]
DC_0413
STR
1–425
DC_0413 DC_0244
cd19958
STR
238–302
cd19958 DC_0151
ADJ53238.1
1 745
Architecture
STR
STR
RBD
STR 1-425 | STR 520-624 | RBD 625-745
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADJ53238.1
1 745
Domain Start End Length (AA) Confidence
N-terminal 1 124 124 0,6776
Central domain 125 333 210 0,1720
C-terminal 334 745 411 0,5995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-124
Central
125-333
C-terminal
334-745

Taxonomy

  Name Taxonomy ID Lineage
Phage Brochothrix phage A9
[NCBI] 		857312 Uroviricota > Caudoviricetes > Herelleviridae > Klumppvirus A9 >
Host Brochothrix thermosphacta
[NCBI] 		2756 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADJ53238.1 [NCBI]
Genbank nucleotide accession
HM242243 [NCBI]
CDS location
range 21820 -> 24057
strand +
CDS
TTGGCTGATTTCAAAACTAACGTGCCTTTATGGGGCAACAAAGGAACTAAACCGTCTGACGGGTTACTAAAGGGCGGTTACGCTCCGAATGATAGACCATCAGCACAAAACACTAACTTTATGTACAATGCGTTTTCTAACGCAATTAAAGAGGTACAAGACAATGTCCCGCTAGAAGCAAATATATTAAATAAAACAGGTGACGTTATTGAGGGTACCATTCTAAGCGCACCAAAACAGCTTAAGTATAGTATAAACAAGGGTAAAGCTAAGGTTCAGGGTAACGTTAACCACTTCTCGGACGTATCCGGCAACTCTAAAATAACAATTACTATTCCTAAAGATGTTGTTATACCGGGAAGACAAACACTTGTTTTCTCTTTCTTACATTCATTCAAAGGCGAAGTAATTAGCCTTGATTTCTCGTCTACGTACGTGTCTGACTTTGCGACAACTAACACAGATAATATCAAAAATGACGAATACCGTAAAGTAAGGTTATCTTTCACCTTAGGTGAAAATGCGCATAATGCTGATATTGTAATTGTCATGAGTGCGAGAGAGCGCAACTTATTCTCATGTACAATCGCAGAGGATTTTGTTACATCTGGATTGATTGGTGTGCCCTATTCTCTTAAAGCAGACTCTTTGATTGCCTTGGACGAAGGGGCTATGCTACCTAAAGAGACACTTCCTAAACTGGACTGTAATGTTATACGTACACCTTACATCGGGTACACTACTAACGCAGTTAATGCGCCTCAAGGAGAGAAACTCGGTACTTTGATGGTGTTCGTTACAGCAGAGACAAGTAAACTAACTCAAGTGTTTACTGGTAACACGTCGGGAAAAGTGTATTATAGGATGATGAACATTGCGAATACATTTTCTAGTTGGGCAGAAGTTCTAACCGGTTCTGCTCTTGCAGATGCGTTGACAAATTATACAACGAAAGAGGACCTTAAAAAAGCGACAGCAGGTATGCTAACAGAGGAGTCTGCAACGAATTGGCAGAAATTTAAAGTGACCCAAGATAATGGTTCTCGTGTAAGACTTACAGAGGGCACTGATTTGTTAACTCTTGCAACAGGCTACTACGAAGTAGCTCAATGTAAAAACAGCCCACTCCCTGAAACTGAGGCGAGTTGGAAAAATGTAGATGTTGTTGAGGGTATTTCGGGTCGTAAAATGTTGCGATTGACAGTATCGGGGGGTGGTGCAACATTTTACAAAACGCTACACACCAATGGTAATGGTGGACGAGACTGGTGGCAAGTTGCTGACGCAGGCGTAACACAAAACAACAGAGTTACTGAAGATAATGGGCGTTTTTATTACAACCTTACTGATAATAAATCAGATATTTTAGCATCAGTAGCTTCCGAAAGTGGTTTTAAAACTGGTTATGCGCATCTCACTGTCCTAAACGGTTTAGGCAATAATCGTAGTTTTAGATTTACGTCTTATTACTATCCTACAAACGGCTACATCCATGCAGTGGATACAGCGGGTCAATCTCATATTAGAGTTTGTAACGGTGGTGTGTGGGGTGATTGGAAGAGTATAGCAGACACGTCTGTTACTCAAAACTTTAAAATCACAAATGATGACGGGTCAGCTATTACAGTTAAAAATTACGATTTACTTAATACGACTGATGCCTCTAACTTTGACGGTTACTCTAACACCGCAATCAATATGCCTGCCGGTGTACATAAGTCAGGATATATTAAGCGTAAGATTCGAGAAGGTTTCATTGAGGTAACGTACAGTCCTTACAACCGAAATACTGTATACCGTAACTCATATAACCCAGAAACCAAAGTTTGGGCGGGTTGGGAGAAACTAGCTACCGCATCCGAAGTGTCCGATATCACTCCTGTTTTGCTATGGGAGGGCTCAGCTAACGGTGCAGGGACAAAAACCTACCCCCTAAAACAAGATGTAATGAAATTCTCTAAGATTAAGATAACACACTACAGTGCGGTATTCAAAAACGCCGTGTCAGAGTATGCGGTACCTGCCAAAATCGGTGATTTTTGGAACTGTATACTATCCCCTAACACTAACCTAACGGATGCAAGAGGGGACCACCCTACAATCTACGAGGTTGCGATTAGGTTCAATAACACCTCTTTTATGATTGAAAGGGATAGCATGTACGAATTCGCTACATCTAAACCTACACTAAACGCCAATCAGGCATACATCACTAAAATAGAAGGAGTGAGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21518b4e88bd2b0d3d1a788753f986fe979e7c16dda17391979c4acd246183f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7471
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of three heterogeneous Brochothrix thermosphacta bacteriophages Kilcher,S., Loessner,M.J. and Klumpp,J. 2010-10-15 — GenBank