Protein

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Genbank accession
YP_006905868.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADAVKEYDIILDVTRPYENQRVIGRLADRGLTSILVKLTKTGLPINLTGYSIYFECRLPYQDGEQINYVRDDGSVYQNLEIVDASQGIFRYTFIKEVWSKVGYMPEAYFALEQLVGTVNKRVTTQNFSLTIQNNATNNSMQTPPFTSDIEAFKDAIRAELADVQTELDNTSDDVTALTGNVATLDTEVKALQASIDANQVVLKTDITNYQPYAFTNANGTRIDLGTLTALSPGLPTLDAKLYEGVSPASLADKATIGFPPQITTTTAVSFQLDVTTGKSGTKILVLRTVPDSVTYEMHVDTSGAVLPWFTYASKEQMVTADTNVQSAASLDATTKANTAQQNAITTATANAKTYTDNVVWSSRVLKANTNVYPNASQTVTFGKNITNMRNGIILVWRWDSSNINYTYTYVPKRHVEAREGVTVGSVIAYSNDTVKDYAGNRTIVKMVRLYNDRLVGHDNNANTTNWSNRVRLEEVLEY
Physico‐chemical
properties
protein length:479 AA
molecular weight: 52944,64440 Da
isoelectric point:5,08939
aromaticity:0,08768
hydropathy:-0,27495

Domains

Domains [InterPro]
DC_1249
STR
1–472
DC_1249
G3DSA:2.60.40.3350
ATT
5–138
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
6–157
IPR018913
SSF58100
Unmapped
105–227
SSF58100
YP_006905868.1
1 479
Architecture
ATT
STR
ATT 1-157 | STR 158-472 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage P70
[NCBI] 		1225800 Uroviricota > Caudoviricetes > Homburgvirus >
Host Listeria
[NCBI] 		1637 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales
Host Listeria sp.
[NCBI] 		1960103 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006905868.1 [NCBI]
Genbank nucleotide accession
NC_018831 [NCBI]
CDS location
range 2418 -> 3857
strand +
CDS
ATGGCTGATGCAGTAAAAGAATATGACATTATACTAGACGTAACAAGACCTTATGAAAACCAAAGAGTTATAGGTCGCCTTGCCGACAGAGGTTTAACGTCTATTCTAGTTAAGCTAACCAAGACTGGACTGCCTATCAATTTAACTGGCTATTCAATCTATTTTGAATGTCGTCTTCCTTATCAAGACGGCGAACAAATTAACTATGTACGTGATGACGGTTCTGTTTATCAGAACTTAGAAATAGTAGATGCTTCACAGGGAATATTCCGCTACACATTTATTAAAGAAGTGTGGTCAAAAGTTGGATACATGCCAGAGGCATACTTTGCATTAGAGCAACTTGTTGGAACAGTTAACAAACGTGTTACTACCCAGAACTTCTCTCTAACTATTCAAAATAATGCAACAAATAATTCCATGCAAACACCACCATTTACATCAGATATTGAAGCTTTCAAAGATGCTATCAGAGCAGAGCTTGCAGACGTACAAACAGAACTAGATAATACTTCTGATGATGTAACAGCATTGACTGGAAATGTAGCAACACTTGATACAGAAGTAAAGGCACTACAAGCTTCTATTGATGCCAATCAAGTAGTTCTTAAAACAGATATTACAAACTATCAACCGTACGCTTTTACAAATGCTAACGGAACTAGAATTGATTTAGGAACATTGACAGCACTATCGCCCGGACTACCTACATTAGATGCGAAGCTATACGAAGGTGTTTCTCCCGCTTCATTGGCTGACAAAGCAACTATAGGTTTCCCACCACAGATAACAACCACAACCGCTGTAAGCTTTCAATTAGATGTTACAACAGGAAAATCTGGAACAAAGATTTTAGTATTAAGAACTGTACCAGATAGTGTGACTTATGAAATGCACGTTGACACGTCCGGAGCGGTGCTTCCTTGGTTTACTTATGCTTCCAAGGAGCAAATGGTAACAGCAGATACAAACGTGCAATCAGCGGCTTCTCTGGATGCTACAACGAAGGCTAACACTGCTCAACAAAATGCCATAACAACAGCTACAGCAAATGCGAAAACATACACAGATAATGTTGTATGGTCTTCACGTGTTCTTAAAGCCAACACTAACGTATATCCAAACGCAAGTCAAACAGTTACCTTTGGTAAGAATATCACAAATATGCGTAATGGAATTATCCTTGTTTGGAGGTGGGATTCTTCTAACATAAACTACACCTACACTTACGTACCTAAACGACATGTAGAAGCTCGTGAAGGAGTTACTGTAGGTTCAGTTATAGCATATTCAAACGATACTGTAAAGGATTATGCTGGTAACCGTACAATAGTGAAGATGGTAAGACTATACAATGACCGATTAGTAGGTCACGATAACAATGCCAATACTACAAACTGGTCAAATAGAGTACGGCTAGAGGAAGTATTAGAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2241da0ea37eba011804b2283321d077a494d77bbd33461d26b3641a073a5b6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8339
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50